Rhinolophus ferrumequinum (greater horseshoe bat): 117036090
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Entry
117036090 CDS
T07722
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117036090 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117036090 (JMJD1C)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117036090 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
117036090
NCBI-ProteinID:
XP_032986603
Ensembl:
ENSRFEG00010022134
UniProt:
A0A671G6N0
LinkDB
All DBs
Position
16:complement(43137287..43391918)
Genome browser
AA seq
2540 aa
AA seq
DB search
MAVETRPELVGKRFLCVAVGEEARPERGQSGRSRRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVRVYEDFSAFLVEYHLIWARRNDPSQTQGSKSKQIQWPALTFKPLVEKS
IPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWIKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNAVHGHYTRAQANSPRPAMNSQAAVPKQNT
HQQQRNSRPNKRKGSDSSIPDEEKMKEEKYDYIVRGENPKGKNKQLINKRRKPDEDEKKL
NMKRLRTDNVSDFSETSDSENSNKRIINNSSEQKPESELKNKNTSKINGEEGKSQNNEKA
GEEKLIDNQPAWDQIQEDKTHEAEKQKSVDSQLQEKMTVHSLEQATLSDHHPNDLLLKEC
NMEKTHTVELLSKEKFVSRPPTPKCVIDITNDTNSEKVAQENSSTFGLQTLQKMDPNISD
SKHSIANAKYLETAKQDSDPSWVSDVVKVDLTQSNVRNTSSGNDHLNVEKEKNPYVSYTS
SLSAVSVTEDKLCKRSPPPETIKSKLNTSVDAHKTKSNPSPEVVKPKVTHSPDSIKSKAT
YLNSQSAGERRLANKIEHELSRCSFHPVPTRGSALETTKSPLIIDKNEHFTVYRDPALIG
SETGANHISPFLNQHPFPLHSSSHRTCINPSTHHPALTPAPHLLAGSSSQTPLPTINTHA
LTSGPHHSVHHPHLLPTVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQS
PHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESSLRRSSP
SPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKSLVDHHKEELERK
AFIEPLRSVSSTSAKNDLDLSRSQTGKDGHLHRHFVDPVMNQLQRPPQETGERLNKYKEE
HRRILQESIDVAPFTTKIKALEGERDNYSRVPSSSSSPKSHVLKHDKDVECSVSDLYKMK
HSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYSEKQSNTLAAAANPQTLTSFISS
LSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTNMLRSMPA
LHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDSQA
NFKTSSEQNVTEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKLDSVPAMP
IASKDRVSERSSTGANQTDCIKPAEAGETGRIILPSVNSDSAHIKSEKNFQAVSQGGVPS
SVVSAVNTLCNTKMDIFTSAATTTSVSRWGGSEIIYSLSNTILASKSLECTSSKSVSHSV
AQTQECRVSTTATVTPASSKTGSAVQPSSGFSGTSDFIHLKKHKAALAAAQYKSSNVSEI
EPNAVKNQTSSAALLLDSTVVCSTINKANSVGNGQASQTSQPNYHTKLKKAWLTRHSEED
KNTNKMENSGSSVSEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYVKDDNKVNRRKAKRT
YESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKEK
SKLKLQSSSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSK
KGEDSTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDLE
TSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVC
QKCGFVVCLDCYKAKERRSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAM
HTLREKYGIKSHCHCTNKQNIPVGNFPTMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQ
KSESNGSNSPGSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEQPIKEEK
EQDNPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPTGK
SGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKESRKSAMDENNKLYSDIPHS
WICEKHILWLKDYKNINNWKLFKECWKYGQPAVVSGAHKKMNINLWKAESISVDFGDHQA
DLLNCKDSIISNANVKEFWDGFEEVSKRQKMKSGETVVLKLKDCPSGEDFKTMMPSRYED
LLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHVEVS
DVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDID
KIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVL
PAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAV
KEMVRALKIHEDETEDMEEN
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcgtggcggtcggt
gaagaggcgcggccggagcgcgggcagagcggtcgcagccggcggggctggcgagcgggg
gtcatccgagctgtgtcacatagggacagccgcaatccggacctggcggtgtatgtggaa
tttgatgatctcgaatgggataaacgagagtgggttagagtttatgaagatttttcagct
ttcttggtggaataccacttaatctgggccagaaggaacgaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacccctggttgaaaaaagt
atacccagttcaatcactgcagtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagtttaaacccagttctcagg
gacaacccacaacttcaggaagaagtgaaagtctggataaaggaacaaaaggttcaggag
atttttatgcaaggtccttattccttaaatggatatagagtgagagtatatagacaagac
tctgccacccagtggtttactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgaaggtctcgtgccagtcaaaatagcaacgctgttcacggtcattatacacgtgcc
caagcaaatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacagaataca
caccagcaacaaagaaatagccgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaaaatgaaggaggaaaagtatgattatatagtacgaggagaaaatcctaaa
ggtaaaaacaagcagttgataaacaaaagaaggaaacctgatgaggatgaaaagaaacta
aatatgaaaagactacgaactgacaatgtttcagacttttccgagaccagtgactcagaa
aattcaaataagagaataataaataattcctcagagcagaagccagaaagtgagttgaaa
aataaaaacacttcaaagataaatggagaagaaggaaaatcccagaataatgagaaggca
ggagaggagaaactaatagataaccagcctgcctgggatcaaatacaagaagataaaaca
catgaagcagagaagcagaagtctgttgactcgcagcttcaagaaaaaatgactgtccat
tcattagaacaggccacactttctgatcatcatcctaatgatttacttcttaaggaatgc
aatatggaaaaaacgcatacagtggaattattgtcgaaggagaagtttgtatccagacca
cccacaccaaaatgtgttattgatattactaacgacactaattccgaaaaagtggctcag
gaaaactcaagtacctttggccttcaaacacttcagaaaatggatcctaacattagtgat
tcaaaacattcaattgcaaatgcaaaatatttggaaacagcaaaacaagattctgacccc
agctgggtcagtgatgtagttaaagtagatttaacccaatcaaatgttaggaatacttct
tcaggaaacgatcatctgaatgtggaaaaagaaaaaaatccgtatgtctcttacacgtct
tctctaagtgcggtttctgtgacagaagataagctgtgtaagcgaagtccccctccagag
actataaagtctaaacttaatacttcagtagatgctcacaagacaaaatccaatccctca
cctgaagttgttaaacctaaagtcacccattctcctgattccataaagtctaaggccact
tacttgaacagtcaatctgctggtgaaagaagactggcaaataagatagaacatgagtta
tcaagatgcagttttcatccagttcctacgcggggcagtgcgttggaaactacaaagagc
cctcttatcattgataaaaatgagcatttcacagtttacagagatcctgcacttattggg
tcagaaacaggagctaatcacatttcacctttcttaaaccagcatccttttcctcttcat
tcttcatcccatagaacctgtataaatccaagtacccatcacccagccttaactcccgca
ccccacctattggctggatcatctagtcaaactccattgcctaccattaacactcacgcc
ctgactagtggtccacaccattctgttcatcaccctcatttacttcctactgtgttacct
ggagtgcctgctgcctccttacttggtggccacccacgactagagactgctcatgccagc
agcttgagccacttagcactagcacaccagcaacagcaacaattgttacagcaccagtca
cctcatcttcttggacaagcccatccttctgcttcatataatcagcttggtctttatcca
attatttggcaatatccaaatggaacacatgcatactcaggacttggtctaccttcttct
aagtgggttcatccagaaaatgcagttaatgctgaatcttcattaaggaggagttctccc
agcccttggttacatcaacccacccctgtgacctcagcggatggtattggattacttagt
cacattcctgtcagaccttccagtgcagagcctcatcgacctcttaaaattacagcgcat
tccagcccaccattgacaaaaagtttagtagatcaccataaagaagaattggaaaggaaa
gcttttattgaaccattacgttctgtttcatccacatcagcaaaaaatgatctggatcta
agtaggtcacagactggaaaagatggccacttgcacaggcattttgtggatcctgtgatg
aatcaattacagagaccaccccaggagactggggagagattaaacaaatacaaggaggaa
caccgtcgaattcttcaagaaagtattgacgttgctccatttacaactaaaatcaaggcg
cttgagggtgagagagataattattccagagtaccatcgtcatcttctagccctaaaagc
catgtcctcaaacatgacaaggatgtagaatgctcagtatcagatctttataaaatgaag
cactcagtgcctcagagtttgccccaaagtaactacttcactacattgtctaatagtgtg
gtcaatgaaccaccaaggtcatacccatccaaagaagtttcaaatatttacagtgaaaaa
cagagtaatacccttgcagcagcagctaatcctcaaactctgacttcatttatatcatct
ctttccaaacctccacctttgattaaacaccaaccagaaagtgaaggtttagtaggcaag
ataccagaacatcttccccatcaaattgcttctcactcagtaacaaccttcagaaatgat
tgtaggagtcctacccatttaacagtttcttctacaaatatgctccggagtatgcctgct
ttacatagagcaccagtatttcaccccccaattcatcacagcctggaaagaaaggaaagc
agctatagtagcctttcccctccaactttaactccagtgatgcctgtaaatgctggtggg
aaagttcaagaatcacaaaagcctccgactctaattcctgagccaaaagactctcaggca
aattttaagacttcttctgaacagaatgtgacggaaatgtggaaatctaataataacctc
agcaaagagaaagctgaatggcatgtagagaaaagcagtggaaagtcacaggctgctatg
gcatctgtcattgtacgtccaccttctagtacaaaacttgatagtgtgccagcaatgccg
atagcttccaaagatcgagttagtgaaagatcttcaactggggcaaatcaaacagattgc
atcaaaccagcagaagctggagagactggaagaatcattctgccaagtgtgaattcagac
agtgctcacataaaatctgaaaaaaactttcaggcggtctcacagggcggtgttcccagt
tcagttgtgtctgctgtaaatacattgtgtaacaccaaaatggatatattcacgtctgct
gccactaccaccagtgtttccaggtggggtggctccgaaataatttactctttatcaaat
accattttggcctctaaatccttagaatgtacctcttcaaaaagtgtcagtcattcagtg
gcacaaacacaagaatgcagggtcagcaccacagctacagttacaccagccagtagtaag
acaggaagtgctgttcagcccagctctgggttctcaggcacaagtgattttattcattta
aaaaagcacaaggcagcactggctgcggctcaatataaaagtagtaatgttagtgagatt
gagcctaatgctgtgaaaaatcagacatcttccgccgcccttctcttggatagcactgta
gtctgtagtacaataaacaaagcaaactctgtaggaaatgggcaagcatcccagacaagt
caacccaactaccatactaaactgaaaaaagcctggcttactagacattcagaagaagat
aaaaatactaataaaatggaaaattcagggagttctgtttcagaaattattaagccatgt
tctgtcaatttaatagcctctacatctaatgatatacaaaatagtgtagatagtaagatc
atagttgataaatatgtaaaagatgataataaggtcaataggagaaaagccaaaagaact
tatgaatctggctctgaaagtggagactctgatgaaagtgaaagcaagtcagagcaaagg
actaaaaggcaacctaagccaacttataaaaagaagcaaaacgatttgcagaagaggaaa
ggtgaaatagaagaagatttaaaacccaatggggttctcagcaggagtgccaaagaaaaa
agtaaattgaagttgcagagcagcagtaatagtgctggcatccctcgttcagtattaaaa
gattggcgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgactcc
tgctgtgagatagggcctaatttgcaaaagtgtcgagaatgtagacttattcggagtaaa
aaaggagaagactcaacccattcaccagtattttgtagattttactactttagacgatta
tcatttagtaaaaatggagtggttagaatagatggtttctcttctcctgaccaatatgat
gatgaagctatgagtttatggacacatgaaaattatgaagatgatgaactagacttagaa
acttcaaaatacatcttggatataataggtgataagttttgtcaattagtaacatctgag
aaaacagctttgtcctgggtgaaaaaggatgctaaaattgcctggaaaagagcagtgaga
ggagttcgggagatgtgtgacgcatgtgaagcaacattgtttaacattcactgggtctgc
cagaagtgcggctttgtggtctgcttagactgttataaggcaaaggaaaggaggagttct
agagataaagaactatatgcttggatgaagtgtgtgaagggacagcctcatgatcacaag
catttaatgccaactcaaatcatacctggttctgttttgacagatcttctagatgcgatg
cacactcttagagaaaaatatggtattaaatcccattgtcattgtactaacaaacagaat
ataccagttggtaattttcctacaatgaacggtgtgtctcaagttttacagaatgttctt
aatcacagtaataaaatttctctgtgcatgcctgagtctcagcagcaaaatacccctcag
aagtctgagagtaatggcagcaacagtccagggagtgatgttagcacagacagcaagtta
actcctccggagtcccagtcaccactgcactggttagcagatcttgcagagcaaaaggcc
agagaggaaaaaaaagaaaacaaagaatttgcccttgaacaaccaattaaagaagagaaa
gaacaggacaatcctgattctccaaacagcagaacatcacctcctgtgtcccagaataat
gaacaaggctcaactttacgggatttactgaccacaacagctggcaagctacgtgtgggt
tctacagatgctggcattgcttttgcaccagtatattcaatgggaaccccaactggtaaa
agtggaaggactatgccaaacattcttgatgacataattgcttcagttgttgaaaacaaa
attccaccaaataaagcatctaagataaatgtaaaaccagagctaaaagaagagcctaaa
gaaagcagaaaatctgccatggatgagaacaataaattgtacagtgacataccacattct
tggatctgtgagaagcatatcctttggcttaaggattataaaaatattaataattggaag
cttttcaaagagtgttggaaatatggacaacctgcagtggtttctggtgcacataagaaa
atgaacattaacttatggaaggcggaatcaattagtgttgattttggagaccaccaggct
gatctcctgaactgcaaagacagcattatttcaaatgccaatgttaaggaattctgggat
ggttttgaagaagtttcaaaacggcaaaaaatgaaaagtggagaaacagttgttttaaaa
ttgaaagactgcccttcgggagaagacttcaagactatgatgccatcaagatatgaagat
cttttaaaaagcctgccattgccagaatattgtaatccagaaggaaaattcaatttggct
tctcatttgccaggattttttgtacgccctgatctaggacccaggttatgcagtgcgtat
ggtgtagttgctgctaaagatcatgatataggaacaacaaatctccatgttgaagtttct
gatgttgtaaatattctggtctatgttggcatagcaaaaggaaatggcattctctcaaaa
gcaggaatcctcaagaaatttgaggaagaagatttagatgacattttgagaaaacgattg
aaggactcaagtgaaattcctggtgctctgtggcatatttatgctgggaaagacattgac
aagatcagggaatttcttcaaaagatttcaaaagaacaaggccttgaagttctaccagaa
catgatccaatacgtgaccaaagttggtatgtgaacaaaaagctccgccaaagactgctt
gaggaatatggagtcagaacctgcacacttattcagttccttggtgatgccattgtctta
ccagcaggagcacttcatcaggtacagaattttcacagctgtattcaggtaactgaagac
tttgtgtctccagaacatcttgtacagtcatttcatttaacacaggaactgagacttttg
aaagaagaaatcaattatgatgataaattacaggttaaaaacatcttgtatcatgcagtc
aaggaaatggtgagagctttgaagatacatgaagatgaaacagaggatatggaagaaaat
tag
DBGET
integrated database retrieval system
