KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117036289
Entry
117036289         CDS       T07722                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117036289 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rfq03021]
    117036289 (TAF5)
   03036 Chromosome and associated proteins [BR:rfq03036]
    117036289 (TAF5)
Transcription machinery [BR:rfq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117036289 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     117036289 (TAF5)
Chromosome and associated proteins [BR:rfq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117036289 (TAF5)
    STAGA complex
     117036289 (TAF5)
    TFTC complex
     117036289 (TAF5)
    SAGA complex
     117036289 (TAF5)
    SLIK complex
     117036289 (TAF5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_Nup120_160 PEP5_VPS11_N RAB3GAP2_N CDK5RAP3 Beta-prop_RIG_1st eIF2A Cytochrom_D1 VPS8_N ABM-like PROPPIN
Other DBs
NCBI-GeneID: 117036289
NCBI-ProteinID: XP_032986968
Ensembl: ENSRFEG00010016357
LinkDB
Position
16:complement(21895258..21908920)
AA seq 806 aa
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGSTTNNGPNSGGGNVAASSSAGRD
GGTPKPSVAVSAVAPAGAAPVPATAPEAGASHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGTGAPGDGDGAGTEAASALLSRVTASAPGPAAPDPPGTGASGAAAVSGSATG
PVAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNSLFFFHRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLT
AVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTAS
ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS
PYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW
DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV
CSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYM
TKSTPVVHLHFTRRNLVLAAGAYSPQ
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcccgagggaccg
ccgacgctgctacctccgcaggctggggacggcgctggcgagggtggcggcagcacgacc
aacaacggccccaacagcggcggtgggaacgttgcggcgtcgtcgtcggccggccgggat
ggtgggacccccaaaccctcggtggctgtctccgccgttgccccggcgggggcggccccg
gtgcccgccactgctccggaggcgggcgcttcccacgaccgacagactctgctggccgtg
ctgcagttcctacggcagagcaacctccgcgaggccgaagaagctctgcgccgggaggcc
cggctgctggaggaggcagtggcgggcaccggagccccgggagatggggacggcgccggc
acagaggcggctagcgcgcttcttagccgggtcacagcctcggctcccggtcctgccgcc
ccagaccctccgggaaccggcgcttcgggagctgccgccgtctcgggctcagcaacaggt
cctgtggctccggggaaagttgggagtgtagctgtggaagaccagccagatgtcagtgct
gtgctgtcagcttacaaccaacaaggagaccccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactcttt
tatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaagatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaagatagtattggatccaaaagcaaaaaacaagatcccaat
gctccacctcaaaacagtctgtttttctttcacagaatccctcttcctgagttgaaagat
tcagataagttggataagataatgaatatgaaagaaaccaccaaacgagtacgccttggg
ccagactgtttaccctccatttgtttctatacattcctcaatgcttaccagggcctcact
gcagtggatgtcactgatgattctagtttgattgctggaggttttgcagattcaactgtc
agagtgtggtctgtaacacccaaaaagcttcgtagtgtgaaacaagcagcagatcttagc
ctcatagacaaagaatcagatgatgtcttggaaagaatcatggatgagaaaacagcaagt
gaattgaagattttgtatggtcacagtgggcctgtctatggagccagcttcagtccagat
aggaactacctgctttcctcttcagaggatggaactgttagattgtggagtcttcaaaca
tttacttgcttggtgggatataaaggacacaactatccggtttgggacacacagttttct
ccatatggatattattttgtgtcagggggccatgaccgagtagctcggctgtgggctaca
gaccactatcaacctttaaggatatttgctggccatcttgctgatgtgaattgtaccaga
ttccatccaaattctaattatgttgctacgggctctgcagacagaactgtacggctctgg
gatgtcctgaatgggaactgtgtaaggatcttcactggacacaagggaccaattcattcc
ttgacattttctcccaatgggagattcctggctacaggagcaacggatggcagagtactc
ctttgggatattggacatggtttgatggttggagaattaaaaggccacactgatacagtt
tgctcacttaggtttagtagagatggtgaaattttggcatcaggttcgatggataataca
gtccggttatgggatgctgtcaaagcatttgaagatttagagactgatgactttactaca
gccactgggcatataaatttacctgagaattcacaggagttactgttgggaacgtatatg
accaaatcaacaccagttgtacacctccattttactcgaagaaacttggttctagctgca
ggagcttatagtccgcaataa

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