Rhinolophus ferrumequinum (greater horseshoe bat): 117036375
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Entry
117036375 CDS
T07722
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfq03016
]
117036375 (TRUB1)
Enzymes [BR:
rfq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117036375 (TRUB1)
Transfer RNA biogenesis [BR:
rfq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117036375 (TRUB1)
Prokaryotic type
117036375 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
117036375
NCBI-ProteinID:
XP_032987138
Ensembl:
ENSRFEG00010006672
UniProt:
A0A671EA01
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All DBs
Position
16:complement(13225561..13259227)
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AA seq
350 aa
AA seq
DB search
MAAVEAAVVPSSSLERDTAPVPRTAGTAAATAATSSATAAAAAVAAAARTGSEARVSKAA
MATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKLLTSMLSGSKRYIAIGELGKATDTLDSTGRITEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLNETKREDDVIKSC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttgaggctgccgtggtgccgtcgtcttctttggaaagagacacagcccca
gtccctcgaactgcaggaacagctgcagcaacggccgccacgtcgtcagcgacagctgca
gcggcggccgtcgcggcagcggccaggactggatctgaagccagggtctccaaggccgct
atggctactaagctgctgtccctgagcggcgtgttcgcggtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaagaggaaaaagcagactttgaaaattggccatggagggactcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaaccaaactgttgacc
agcatgttgtcagggtccaagaggtacattgccattggagagctggggaaagccactgac
acgctagattctacagggagaataacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattttacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtagta
gaagcaaagcctgccaggccagttactgtgtacagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtgcttgagctgactcgaaccaaacag
ggaccatttacactagaagagcatgcccttcccgaagacaaatggacaattgatgacatt
gcacagtctcttgagcattgctcatctcttctcccagcagagttggcacttaagaaatca
aaacccgaggagtctaatgaacaagttttgagctgtgaatatataactctaaatgagaca
aagagagaagatgatgtaattaagtcgtgttaa
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