Rhinolophus ferrumequinum (greater horseshoe bat): 117036377
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Entry
117036377 CDS
T07722
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04382
Cornified envelope formation
rfq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
117036377 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
117036377 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
117036377
NCBI-ProteinID:
XP_032987141
Ensembl:
ENSRFEG00010015674
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Position
16:21322305..21370407
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AA seq
1446 aa
AA seq
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MDVTKRNKRDGTEVTERFITETVTTRLTSLPPKGGTSNGYAKTGGGSRLEKQSLTHGSSG
YINSSGSARGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEGSSSGNSSPEYP
RKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNSSNT
LPIPKKGTVETKKVTASSHSVSGTYDTTILDANLPSQMWSSTLPAGSSMGTYHNNMTTQS
SSLLNANTYSAGSVFGVPNNMASCSSTLHPGISTCSSVFGMQNNLAPSSSALSHGTASTS
TAYGMKKNMPQGPPVVSTGVSTSAACTTSVQDDLLHKDCKFLILEKDSAPAKKEMELLIM
SKDSGKVFTASPASITATSFSEDTLKKEKQAAYTADTSLTSEANGQVKTVSTKGKATSAE
NHGYDQHNGNSGFKGGGGGVGGGVGGGPWGAAPAWCPCSNCCSWWKWLLGLLLTWLLLLG
LLFGLIALAEEVRKLKARVDELERIRSGMSQYEEELIKRSNQERLQGLAPSAGGGFGTSG
LDGHSQEALWLFVRNKLMTEQENGNLRGNPGPKGDVGSQGPKGDQGFPGPPGIPGVLGKP
GPEGPKGQKGNVGEPGIEGPMGQRGREGPMGPRGEPGPPGSGEKGDRGPVGEPGIPGPPG
VPGSVGPKGASGSPGPQGSPGLQGLRGEVGLPGIKGDKGLMGPPGPKGDQGEKGPRGLTG
EPGSKGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGSPGPSGDPGKPGLTG
PQGPQGLPGTPGRPGPRGEPGAPGRIVTAEGSSTLTVPGPPGPPGAMGPPGPPGAPGPVG
PAGLPGQQGPRGEQGLAGESFLSSSSSISELLSAQGLDLRGPPGPPGPPGPPGPSIPGTS
RPQGSTENFYPGPPGPPGPRGPKGDQGDPGVPGSPGIPGGRSQGGSSSSTMFLPGPPGPP
GPPGPPGSISSSGLEIQHYISEYMQSDSVRSSLSGVQGPPGPPGPPGPVITMAGETFDYS
ELANLVVSYLRTSGYSFGSSASISSEDILAALRREDVIQYLRQYLTGPRGPPGPPGASGD
WSLQSLDYAELSNRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLQGSEYRGIIGP
PGPPGPPGIPGNAWSSISVEDLSSYLHTAGLSSIPGPPGPPGPPGPRGPPGVSGALTAYA
AENSDSFRSELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLGSVDGSYSRGSSSSHSSS
VSRGTSYSSSMGIGGTSGGSLGEGGAFGPDGSLGRGYGAAAEGGVYAGDSGSFGAGFAGG
LDYNELAVRVSENLQRQGLLQGLPYTVQGPPGQPGPQGPPGVSRVFSAYTNVTEDLMDFF
RTYGAIPGPPGQKGEVGIPGPKGARGPAGPPGHPGPPGPRGHKGEKGDKGDQVYVGRSRR
NVALKP
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagagaaacaaacgagatggcacagaagtcactgaaagatttatcacc
gaaactgtaactacaagacttacatccttaccgccaaaaggagggaccagcaatggctat
gctaaaacaggtggagggagccggctggagaaacagagcctgacacatggtagcagtggc
tacataaactcaagtggaagcgcacgaggcaatgcctccacctccagttatcggagggct
cattcacctgcctccactctgcccaactccccaggctcaacctttgaaaggaaaactcac
atcacccgccatggaacatatgaagggagctccagtggcaactcttctccagaataccct
cggaaggaatttgcatcttcttcaaccagaggacggagccaaacacgggagagcgaaatc
cgagttcgactgcagagtgcgtccccatctacccgatggacggagttggatgatgttaaa
cgtttgctcaagggcagccgatcagccagcgtgagccccactcggaattcctccaacaca
ctgcccatccctaagaaaggcactgtggagaccaaaaaggtgacggcgagctcccactca
gtgtccggcacctatgacacaactatcctggatgccaaccttccctcccaaatgtggtcc
tccaccttgccagcggggtcctccatgggaacctatcacaacaacatgacaacccagagc
tcatccctcctcaacgccaacacctattctgcaggatcagtctttggagttccaaacaac
atggcatcctgctcctccactctgcaccccggaatcagcacctgttcctcagtgtttggc
atgcagaacaacctggcccccagctcatctgccctgtcccatggcacagccagcacctcc
acagcatatggtatgaagaaaaacatgccccaaggccctcccgtcgtgagcactggcgtg
tccacctctgccgcctgtaccacaagtgtccaggacgacctcttgcacaaggactgtaag
ttcctgatcttggagaaagacagcgcgcctgccaagaaggagatggagctgctgatcatg
agcaaggacagcgggaaggtctttactgcctcccctgccagcatcactgcaacctctttt
tcagaggacaccctaaaaaaggaaaagcaagctgcttacactgctgacaccagcctaacg
tcagaggctaatggacaggtgaagactgtgtccacaaagggcaaggccacctcagcagaa
aaccatggctacgaccaacataatggcaacagtggctttaaaggtggcggtggtggcgtt
ggcggcggtgttggcgggggcccgtggggggcggcaccagcctggtgcccctgcagcaac
tgctgcagctggtggaaatggctgctgggcctgctgctcacctggctgctcctcctgggg
ctgctcttcggcctcattgctctggcggaggaggtgcggaagctgaaagcacgcgtggac
gagctggagcgaatcaggagtgggatgtcgcagtatgaggaggagctgataaaaaggagc
aaccaggagcgactgcaggggctggcgccctcggcaggcggaggctttggtacctctggg
ctggacggccacagtcaggaggcactctggctgttcgtgaggaacaagctgatgacagag
caagaaaatggcaatctgcgaggaaaccccggacccaaaggtgacgtgggaagtcaaggc
cctaaaggagatcaagggttccctgggcctccaggtatccctggggtcttgggcaaacca
ggtccagaaggaccaaagggacaaaaaggcaatgtgggagagcccggcatcgaggggcca
atgggccagagagggcgtgaaggccccatgggacctcgtggtgaaccagggccacctggg
tctggagagaaaggggacagagggcctgttggtgagccggggattccgggtccacctggt
gtcccgggttctgtggggcccaaaggtgccagcggttctcctggcccacagggttctcca
ggtcttcaagggctccgaggtgaagtgggactccctggtatcaaaggtgacaaaggactt
atgggaccaccaggacccaaaggtgaccagggtgagaaaggaccccgaggcctcacaggc
gagccaggctcaaaaggtctgcctggtgctgtgggcgagcctggagctaaaggagcaatg
ggacctgctggcccggatggacaacaaggcccacgaggtgaacaaggtctcacagggatg
cctgggacccgaggctcaccaggaccttctggagacccaggaaagccaggtctcaccgga
ccccaaggacctcagggacttcctggcacccccggccgaccagggcctagaggtgaaccg
ggagctccaggcaggatcgtgactgcagagggatcatcgactctcactgtcccaggcccc
ccgggacctcctggagccatgggacccccaggacctccaggtgccccaggccctgtcggc
ccagctggtctcccaggacaacaaggcccgcgaggggaacaaggacttgctggtgaatcg
ttccttagcagcagcagctccatctccgagctcctctccgcccagggtcttgatttacga
ggtcccccaggcccaccaggaccacctgggccaccaggaccttccatcccaggcacatca
agaccccaaggctccacagagaacttctaccctggccctccaggcccacctggcccccga
ggccccaaaggagaccaaggtgatcccggagtcccagggtctcctggcattcctggcggt
cgctctcaagggggatcatcatccagcaccatgttcctgccaggcccaccagggccccct
gggccccctggacccccgggctccatcagcagctctggcctggagattcagcactacatc
tctgagtacatgcagagtgacagtgtcaggtcttctctatctggagttcagggtcccccg
ggcccacctggtccccctgggcctgtcatcaccatggcgggtgagactttcgactactca
gagctggcaaacctcgtcgtgagctacttacggacttcggggtacagctttggctcgtct
gcttccatctcttctgaagacatcctggctgcactgcggcgggaggatgtgattcaatat
ctacgtcagtacctgacaggccctcggggtcccccggggccaccaggcgccagtggagat
tggtccctccagtctttggactacgcagagctgagcaatcgcattctcagctacatgtcg
agttctggaatcagcattgggcttccgggccccccgggcccccctggcttgccgggaaca
tcctatgaggagctcctctccttactccaagggtctgaatacagaggcatcattgggccc
ccaggtccccctgggccaccagggatcccaggcaacgcatggtccagcatcagcgtggag
gacctctcatcttacttgcatactgctggcttgtcatccatcccaggccctccaggccct
cctggtcccccaggccctcgagggcctccaggtgtctcaggagctctgacagcctacgca
gctgaaaacagcgacagcttccggagtgagctgatcagctacctgacaagtcctgatgtg
cgcagcttcattgtggggcccccaggccctcccgggccccagggcccccctggagacagc
cggctggggtccgtggacggctcctacagtcgtgggagcagctcttcacacagctcatcg
gtcagccggggcacctcctacagctcttccatgggcatcggaggaaccagtggaggttcc
ctaggcgaagggggagcctttggcccggacggtagcctgggccgaggctacggggcagca
gcagaaggtggcgtgtacgctggcgacagcggctccttcggggccggctttgctgggggc
ctggattacaacgagctggctgtgcgcgtgtctgagaacttgcaacgtcagggcctgctg
caagggttgccctacactgtccagggcccaccgggccagcctgggccccaggggcctccc
ggcgtcagcagggtcttctctgcctacaccaacgtgactgaggacctcatggactttttc
cgaacttatggagccattccaggacctcctggacagaagggagaggtgggcatcccagga
cccaaaggtgcgaggggccctgccgggccacctggtcatcctgggccacccggccctcga
gggcacaagggagaaaaaggtgacaaaggtgaccaagtctatgttgggcggagccggaga
aatgtcgccctcaagccatga
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