Rhinolophus ferrumequinum (greater horseshoe bat): 117036549
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Entry
117036549 CDS
T07722
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117036549 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117036549 (MBD4)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117036549 (MBD4)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117036549 (MBD4)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117036549 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
BrxC
Motif
Other DBs
NCBI-GeneID:
117036549
NCBI-ProteinID:
XP_032987347
Ensembl:
ENSRFEG00010018007
LinkDB
All DBs
Position
17:41697001..41707391
Genome browser
AA seq
562 aa
AA seq
DB search
MESPSLGNCGASPLVTFSEHLIPDQPCDRREEVATLGSERAEEDEKQMVIKSSSECNPLL
QESIASAQFGEMTECHKSIPCGWERVVKQRLSGKTAGKYEVYFISPQGLKFRSKSSLANY
LHKNEETSLKPEDFDFTVLSKRGIKSRYKDCSMAAVTSQLQSESSISNRTRSKCKKDVFP
LPSGGLELQGSRGLSNFTSIHLLLKEGESVNNADSRKTRKSKGKRTILKGIQIKKTKTEC
QESLPDSARSTRKRASVYIKADAESEPVAQESQLDRTFCVSDAKASNKTSEEKRLTKEKS
LSSGSNFNFEQITSGLVNELHSTKEAEHNKSEDNFLESEEITKVEVGERKEHLHTDSLKC
GSEMENNCSQIEKDSSSVNICQEDTIPRTQIGKRKTSLYFSSKYNKEALSPPRRKAFKKW
TPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWRD
VSELLKPLGLYELRAKTIIRFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCINEWKQVHP
EDHKLNKYHDWLWENHEKLSLS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccgagcctggggaactgtggagcctcccccttggtcaccttcagtgaacac
ctaatcccagaccagccatgtgaccgccgtgaggaagttgctaccctgggatcagaaaga
gcagaagaagatgagaaacaaatggtgataaaaagcagcagcgagtgtaatcccctgcta
caagaatccattgcttctgctcagtttggtgaaatgacagaatgccataagtctatccca
tgtggatgggaaagagttgtgaagcaaagattatctggaaaaacagcaggaaaatatgaa
gtatattttatcagcccacaaggactgaagttcagatccaaaagttcacttgctaattat
cttcacaaaaatgaagagacttctcttaagccagaagattttgattttactgtactttct
aaaaggggcatcaagtcaagatataaagactgcagcatggcagctgtgacatcccaactg
caaagcgaaagtagcatttcaaaccggacaagaagcaaatgtaaaaaagatgtgtttcct
ctgccaagtggaggtttggaattgcaaggtagtagaggactatctaactttacttccatt
catttgcttttgaaagaaggtgagagtgttaataatgctgactccagaaagacgagaaag
tccaaaggaaagaggactattttgaaaggaattcaaattaagaaaactaaaactgagtgc
caggaaagtcttccagattctgctcgaagtactagaaaaagagcatctgtgtatattaag
gcagatgctgaaagtgaacctgttgcacaagaaagtcagcttgatagaactttctgtgtt
tctgacgccaaagcaagcaacaagaccagtgaagaaaagagacttacaaaagaaaagtca
ttgagttcaggatcaaattttaattttgaacaaataacttctggcctcgtaaacgaattg
cattcaaccaaagaagcagaacacaacaagtctgaggataactttttagaatctgaggaa
ataacaaaagtagaagttggggaaaggaaggaacatttgcatactgacagtttaaaatgt
ggttctgaaatggaaaacaactgctcacaaattgaaaaagactcttcttctgtgaacata
tgtcaagaagacaccattccacgaacacaaataggaaaaaggaaaacaagcctatatttt
tccagcaaatacaacaaagaagctcttagccccccacgacgcaaagcctttaagaagtgg
acacctcctcggtcaccttttaatcttgtccaagaaacactttttcatgatccttggaag
ctcctcatcgcgactatatttctcaatcggacctcaggcaaaatggcaatccctgtgctt
tgggagtttctggagaagtatccttcagctgaggtagcaagaactgcagactggagagat
gtgtcagaacttcttaaacctcttggtctctacgaacttcgagcaaaaaccattatcagg
ttctcagatgaatatctgacgaagcagtggaaatatccaattgagcttcacgggattggc
aaatatggcaacgactcctaccgaattttttgcatcaatgagtggaagcaggtacaccct
gaagaccacaagttaaataaatatcatgactggctttgggaaaatcacgaaaaattaagt
ctgtcttaa
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