Rhinolophus ferrumequinum (greater horseshoe bat): 117036737
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Entry
117036737 CDS
T07722
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03082
ATP-dependent chromatin remodeling
rfq04714
Thermogenesis
rfq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117036737 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
117036737 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
117036737 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117036737 (SMARCC1)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117036737 (SMARCC1)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117036737 (SMARCC1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117036737 (SMARCC1)
PBAF complex
117036737 (SMARCC1)
GBAF(ncBAF) complex
117036737 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
117036737
NCBI-ProteinID:
XP_032987760
Ensembl:
ENSRFEG00010010455
UniProt:
A0A671EQJ3
LinkDB
All DBs
Position
17:8043451..8188209
Genome browser
AA seq
1101 aa
AA seq
DB search
MAAAAGGGGPGAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWIHINDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSVRQRI
PTKNEEPVRSPERRDRKASSNARKRKHSPSPPPPTATESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGI
KEDEDPSKGDQNRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGTEEEK
METDTDGQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDAKSEEKETEENKE
LTDTCKERESDIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPPQAHQHSGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQMPGPG
SMMPGQPMPGRMIPTVGANLHPPGGGPPPPGMPPMPGNMLGPRVTLTAPNGMYPPPPQQP
PPPADGVPPPPAPGPPASAAP
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagcgggcggcggcgggccgggggcagcggcaggagccgctggtgcggga
ggcgcggcggcggctgcgggcctggcggtttatcggcggaaggacgggggcccggccagc
aagttttgggaaagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacgctggctgggctg
gtggtgcagcttctgcagtttcaggaagatgcctttgggaagcatgtcaccaaccccgcc
ttcaccaaactccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatctacag
aatccttcccgaatggatcgtaatgttgagatgtttatgaacatagaaaaaacactggtg
cagagcaattgcctgaccagacccaacatctacctcattccagacattgatctgaagttg
gccaacaaattgaaagatatcatcaagcgacatcagggtacatttactgatgagaagtca
aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagaatggttgaga
cctgtgatgagaaaagacaagcaagtgttagtgcattgggggttttacccagacagctat
gacacttggatccatattaatgatgttgatgcggaaattgaagacccaccaattccagaa
aagccatggaaggttcacgcaaaatggattttggacactgatgttttcaatgagtggatg
aatgaagaggattatgaggtggatgagaacaggaagcctgtgagtgttcgtcagcgaatt
ccaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcatcc
aatgctcgaaagaggaaacattcaccttcccctccacctcccacagccacagagtcacgg
aagaagagtgggaagaaaggccaggctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttacaaaggacatggaagacccaacgcctgtacccaacatc
gaggaagtggtccttccaaaaaatgtaaatccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtagcagatctagatgagcaggatgaagaaacagtcacaacaggaatc
aaggaagatgaagatcccagcaaaggtgaccagaatcggtcagttgaccctggagaagat
aatgtgacagagcagaccaatcacattattattcctagctatgcatcgtggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa
tccaagactccagagatatacttggcatatcgaaattttatgatcgacacatatcgccta
aacccccaagaatatttaaccagcactgcttgtcggaggaacttgactggagatgtgtgt
gctgtgatgagggttcatgcctttttagagcaatgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatgggacctcctcctactcctcatttcaatgtactggct
gataccccctctgggctcgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
ctccgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgcgagtgccgga
agagaatggactgaacaggagacccttctgctcttggaggccctggaaatgtacaaggat
gattggaacaaagtgtcagaacatgttggaagtcgcactcaggatgaatgcatcctccac
tttttgaggcttcccattgaggacccgtaccttgagaattccgatgcttccctggggccc
ctagcctatcagcccgtcccctttagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaggcagctttggag
gagttttctcgggtccgggaggaggtaccgctggaattggttgaagctcatgtcaagaaa
gtacaagaagcagctcgagcgtccgggaaagtggatcccacctatggcctggagagcagc
tgcattgcaggcacgggacccgatgagcccgaaaagcttgaaggaactgaagaggaaaaa
atggagacagatactgatggtcagcagcctgagaaggcagaaaacaaaggggaaaatgaa
acggatgaaggtgataaagcacaagacggagaaaatgaaaaaaatagtgagaaggaacag
gatagtgaagttagtgaggacgccaaatcagaagaaaaggagactgaagagaacaaggaa
ctcactgatacttgtaaagaacgagaaagtgatatcgggaagaagaaagtagaacatgaa
atttctgaaggaaacgtcgccacagccgcagcagctgctcttgcctcagctgcaaccaaa
gccaagcacctggctgccgtggaagagagaaagatcaagtctctcgtcgctctcctggtt
gagacacagatgaagaaactggagatcaaacttcggcattttgaggagctggaaacaatc
atggacagagagaaagaggctttagaacaacagaggcagcagttgcttactgagcgccag
aacttccacatggaacagctgaaatacgcggaattgcgagcccgccagcaaatggaacag
cagcaacacgggcagaaccctccgcaggcacaccagcactcaggaccaggcctggcgcct
ctgggagcagcagggcaccccggcatgatgcctcatcagcagccccctccctaccctctg
atgcaccaccagatgccgccacctcacccaccccagccagggcagatgccaggcccaggt
tccatgatgcccgggcagcccatgccaggccgcatgattcccaccgtcggagccaacctc
cacccccctgggggcgggcccccccctcccgggatgcctccaatgccaggcaacatgtta
ggaccccgggtgaccctcacggcgccgaacggcatgtatccccccccgccgcagcagccg
ccgccacccgcagatggagtccctccacctcctgctccaggcccaccagcctctgccgcg
ccctag
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