Rhinolophus ferrumequinum (greater horseshoe bat): 117037141
Help
Entry
117037141 CDS
T07722
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117037141 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117037141 (TRIM71)
04121 Ubiquitin system [BR:
rfq04121
]
117037141 (TRIM71)
Enzymes [BR:
rfq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117037141 (TRIM71)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117037141 (TRIM71)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117037141 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
Motif
Other DBs
NCBI-GeneID:
117037141
NCBI-ProteinID:
XP_032988756
Ensembl:
ENSRFEG00010006548
UniProt:
A0A671EGN9
LinkDB
All DBs
Position
17:complement(17964782..18027414)
Genome browser
AA seq
868 aa
AA seq
DB search
MASFPESDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAVARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPSPKNGRAGAQASAAGHSNHRHHAHHAHPRAPASAPPLPQAPPPPAPSRSA
PGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIER
GPPGPAAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQ
VLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEV
SDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVMVKSGRSYVGIGLPGLSFGSEG
DGDGKLCRPWGVSVDKEGFIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVA
CDASRRIVVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQ
MDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccctgagagcgacttccagatctgcctgctctgcaaggagatgtgcggc
tcgccggcgccactctcctccaactcgtctgcgtcgtcgtcttcctcacagacgtccacg
tcgtcggggggcggcggcgggggccccggggccgtggcgcgccgtctgcacgttctgccc
tgcctacacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggccggcggc
ggcgcgccgggtgagccactcaaactgcgctgccctgtgtgcgaccagaaagtagtgctg
gccgaggcggcgggcatggacgcgcttccctcgtccgccttcctgcttagcaacctgctc
gacgccgtagtggccaccgcggacgagccatcgcccaagaacgggcgtgccggcgcccaa
gcgagcgcggccggccacagcaaccaccggcaccacgctcaccacgcgcacccgcgcgcg
cccgcctcggcgccgccgctcccgcaggcgcctccgccgcccgcgccttcccgctctgcg
cccggcgggccggctgcttccccatcggcgctgctgctgcgccggcctcacggctgcagc
tcctgtgacgagggcaacgccgcctcgtcgcgctgcctcgactgccaggagcacctgtgc
gacaactgcgtccgcgcgcaccagcgcgtgcgcctcaccaaggaccactacattgagcgc
ggcccgccgggtcccgccgccgccgccgccgcacagcagctcggactcgggccgcccttc
cccggcccgcccttctccatcctctctgtcttccctgagcgcctcggcttctgccagcac
cacgacgacgaggtgctgcatctgtactgtgacacttgctcagtgcccatctgccgtgag
tgtacaatggggcggcacgggggccacagcttcatctacctccaggaggcgctgcaggac
tcgcgggcgctcaccatccagctgctggcggacgcccagcagggccgccaggcaatccag
ctgagcatcgagcaggcccagactgtggcagagcaggtggagatgaaggccaaagtggta
cagtcggaggtcaaagccgtgactgcaaggcataagaaggccctggaagagcgggagtgc
gagctgttgtggaaggtagagaagatccgccaggtgaaagccaagtctctgtacctgcag
gtggagaagctgcggcagaacctcaacaagctggagagcaccatcagtgccgtccagcag
gtcctggaggaggggagggccctggacatcctgctggcccgagaccgcatgctggcccag
gtgcaggagctgaagaccgtccgcagcctcctgcagccccaagaagacgaccgggtcatg
ttcacaccccccgatcaggcgctgtacctcgccatcaagtccttcggcttcgtcagcagc
ggggccttcgcgcccctcaccaaggccacaggcgatggcctcaagcgggccctgcagggg
aaggtggcctccttcactgtcattggctacgaccacgacggggagcctcgcctctcggga
ggcgacctgatgtctgccgtggtcctgggccctgacggcaacctgtttggggccgaggtg
agtgatcagcagaacgggacttacgtggtgagctaccggccgcagctggagggagagcac
ctggtgtccgtcaccatgtgcaaccagcacattgagaacagccccttcaaggtgatggtc
aagtccggccgcagctacgtgggcattgggctccctggcctgagctttggcagcgagggt
gacggcgacggcaaactctgccgcccttggggcgtgagtgtggacaaggagggcttcatc
gtcgtcgccgaccgcagcaacaaccgcatccaggtgttcaagccctgtggcaccttccac
cacaagttcggtaccctgggctcccggcccgggcagttcgaccgaccggcaggggtggcc
tgcgacgcctcccgaaggatcgtggtcgctgataaggacaatcatcgcatccagatcttc
acctttgacggccagttcctcctcaagtttggcgagaaaggaaccaagaatgggcagttc
aactacccgtgggatgtggcggtgaattctgagggcaagatcctggtctcggacactcgg
aaccaccggatccagctgttcgggcccgatggagtcttcctgaataagtatggcttcgag
ggggctctctggaagcactttgactcccctcggggtgtggccttcaaccacgagggtcac
ttggtggtcaccgacttcaacaaccaccgactcctcgtcatccaccccgattgccagtcg
gcacgcttcctgggctcagagggcaccggcaatgggcagttcctgcgcccacagggtgtg
gccgtggaccaagaggggcgcatcatcgtggctgattccaggaaccaccgggtacagatg
ttcgaggccaacggcagcttcctgtgcaagtttggcgctcagggcagtggctttgggcag
atggaccgcccttccggcatcgctgtgacccccgacgggatgatcgttgtggtggacttt
ggcaacaatcgaatcctcatcttctaa
DBGET
integrated database retrieval system
