Rhinolophus ferrumequinum (greater horseshoe bat): 117037240
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Entry
117037240 CDS
T07722
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04382
Cornified envelope formation
rfq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
117037240 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
117037240 (COL7A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
117037240
NCBI-ProteinID:
XP_032988980
LinkDB
All DBs
Position
17:7525065..7556145
Genome browser
AA seq
2924 aa
AA seq
DB search
MRLPLLVAALCAGILAGAPQARAQHRERVTCTRLYAADIVFLLDGSSSIGRSNFREVRGF
LEGLVLPFSGAASAQGVRFAAVQYSDDPRTEFGLDTLGSGGDVIRAIRELSYKGGNTRTG
AAILHVADHVFLPQLARPGVPKVCILITDGKSQDLVDTAAQKLKGQGVKLFAVGIKNADP
QELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPPDDSTSGPRDLVL
SEPGSQSLKVHWTAASGPVTGYKVQYTPLTGLGQPVPSERREVSVPAGETSTRLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLLAWRNVPGATGYRVTW
RVLIGGATQQQELGPGQGSVLLRDLEPGTDYEVTVSALLGRSVGSATSLTARTETSIEQT
LRPVILGPTSILLSWNMVPEARGYRLEWRRESVLEVPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGPEQPVGPVTDLQATELPGQRVRVSWSPVPGATEYRIT
VRSIQGVERTLVLPGSQTAFDLDDVRAGLSYTVRVSARVGAREGGVSILTVRREPETSLA
IPGLRVVASDATRVRVAWGPVPGASGFRISWRTDSGPESSQTLPRESTATDIMGLRPGTS
YQVSVSALRGREEGPPAVVVAQTDPLGPVRNVHMTQTSSSAVTIAWNRFPGATGYKVSWR
SGHGPERSQLVSGEATMAELDGLEPGTEYLVHVWAHVAGVEGTPASLVVKTDPVPVGSVS
KLQILNASSDVLRITWVGVPGATAYRLAWGQSEGGPTRQQMLPGNTDSAEIRGLEGGVSY
SVRVTALVGDREGAPVSIVVTTPPEVPPALETLRVVQRGEHSLRLRWQPVSGAHGYRLRW
RPEGGQEQSRVLGPELSSYELDGLEPATPYRIWLSVLWPAGEGPPTEVTAYTESPRVPST
ELRVVDTSVDSVTLAWTPVSGVSSYILSWRPLRRPGQEMPGTSQTLPGISSSQQVTGLEP
GIDYIFTLTPIREGVQGPKATVTQSPMCPHGLMDVVFLLHTTRDNADRSEAVKRALGRLV
SALGPLGPHAVQVGLLSYNHRPSPLFPLNSSHDPGAILQKIRDIPYVDPNGNNLGTAVSA
AHKYLLAPDAPGRRRQVPGVMVLLVNEPLRGDIFNPIREVQAAGLKVMILGLVGADPEQL
RRVVPGMLPVQTFFAVDDGPSLDQAVNSLATILCQPQTEPCSVHCPKGQKGEPGEMGLKG
QAGPPGTPGLPGRIGAPGPQGPPGSSIAKGERGYPGAGGAPGSPGLPGTPGTPGPKGSPG
WPGSPGEPGERGPRGPKGEPGEPGRVTGGDGPGLPGPKGDPGPPGPPGSHGPLGDPGPRG
PPGLPGTAVKGDKGDRGERGPPGPDMDGSAPGDPGLPGLPGSPGLPGPIGPSGKKGEKGD
CEDGAPGLPGQPGPPGERGLRGPPGDVGPKGDRGLQGAVGETGEKGERGSPGPGGPQGLP
GVAGHPGVEGPEGPPGPTGRRGEKGEPGRPGDPAVGPTGAGVKGEKGEVGPTGPKGATGV
KGEPGPPGLVLPGDPGPKGDPGNRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPAGPIGPR
GRDGEAGEKGDEGPPGDPGLPGKTGERGIRGTPGARGPVGEKGDQGEPGEDGRNGSPGPA
GPKGDRGDPGPPGPPGRQVDTGLGAREKGEPGDRGQEGPRGPKGDPGTPGASGERGIDGL
RGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGTPGPPGLHGATGKAGDPGRDGL
PGLRGEQGPPGPPGPTGALGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGH
DGPKGERGAPGSPGLPGPPGLPGQVGPPGQGFPGVPGSLGPKGDRGDSGSKGEQGLPGER
GLRGEPGSVTNVERLLENIGIKASALREIVETWDESSGSFLPVPDRRRGPKGDPGERGPP
GKEGPIGFSGDRGPKGDRGDPGPQGPPGLALGERGSPGPPGLAGEPGKPGIPGLPGSAGG
VGEPGRPGERGERGEKGERGEQGRDGPPGVPGPPGPPGPKVAVDEPGPGFPGLKGAKGDP
GSDGDRGPKGDRGVPGIKGDRGEPGQSGHGGSPGLPGERGVAGPEGKPGPQGPRGAPGPA
GGHGDPGPPGAPGLAGPSGPQGPSGLKGEPGETGPPGRGLPGPTGPVGLPGPPGSSGLVG
PQGAPGLPGQVGETGKPGVPGRDGASGKDGDRGAPGVPGSPGLPGPVGSKGEPGPMGAPG
QAVIGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGFK
GAPGLKGQKGDPGIGVQGPPGQTGPPGLKGELGLPGPPGAPGIVGFPGQPGLRGEMGQPG
APGERGLAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGDKGDPGVGLPGARGERGEPGV
RGEDGHPGQEGPRGLMGLPGGRGERGEKGDPGTAGLKGDRGDSAVIAGPPGPRGAKGDMG
ERGPRGTDGEKGPRGDSGIPGEKGTKGEPGDKGSAGLLGARGLTGPKGEPGAVGFPGDPG
FPGKDGAPGIRGEKGDIGFMGPRGLKGERGVKGACGLDGEKGDKGEAGSPGRPGLAGRKG
DMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGIGGLPGPKGNEG
SSGPPGLPGSVGPKGSEGLQGQKGERGPPGQSVVGAPGTPGAPGERGEQGRPGPAGPRGE
KGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLQSYAADTAGPQRRLVPVLQVSHA
DEEGRVPPEDDEYEYSEYSVEDYQDPETAWDGADPCSLPLDEGSCTAYTLRWYHRAVAGG
TESCHPFVYGGCGGNANRFGTREACERRCPPRVVQSQGTGALQS
NT seq
8775 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccgctcctggtggccgcgctctgcgccgggatcctggcaggggcgccccaa
gcacgggcccagcacagggaaagagtgacctgcacgcgcctttatgcggctgacatcgtg
ttcctgctggacggctcctcgtccatcggccgcagcaacttccgcgaagtgcgtggtttc
cttgaggggctggtgctgcccttctctggagcagccagtgcacagggtgtccgcttcgct
gctgtgcagtacagtgacgacccacggacagagtttggcctggatacacttggctcaggg
ggtgatgtgatccgtgccatccgtgaactcagctacaaggggggcaacacgcgcacaggg
gctgcgattctccatgtggctgaccatgtcttcctgccccagctggcccgacctggtgtc
cccaaggtctgcatcctcatcacagatgggaagtcccaggacctggtggacacagctgcc
cagaagctgaaggggcagggggtcaagctgtttgctgtggggatcaagaatgctgacccc
caggagctgaagagagttgcctcacagcccaccagcgatttcttcttcttcgtcaacgac
ttcagcatcttgaggacgctgctgcccctcgtttccaggagagtatgcacaactgctggt
ggtgtgcccgtgaccctgccccctgatgactcgacctctggtccacgagacctggtgctg
tctgagccaggcagtcaatccttgaaagtacactggacagcagccagcggtcctgtgact
ggttacaaggtccagtacactcccctgacagggctgggacagccagtgccgagtgaacgg
cgggaggtgagcgtcccagctggtgagaccagcacgcggctgcagggtctccggccactg
accgagtaccaagtaactgtcgttgccctctacgccaacagcatcggggaggccgtgagc
gggacagctcggaccactgccctagaggggccggagctgaccatccagaacacgacagcc
cacagcctcctgctggcctggcggaatgtgccaggtgcaactggctaccgtgtgacatgg
cgggtgctcattggtggggccacacagcagcaggagctgggccctggacagggttcagtg
ttgctgcgtgacctggagcctggcacagactatgaggtgaccgtgagtgccctgcttggc
cgtagcgtggggtctgccacctccctgactgcccgtactgaaacttccattgagcagaca
ctgcgtccggtcatcctgggaccaacatccatccttctttcctggaatatggtgcctgag
gcccgtggctaccggctggagtggcggcgtgagagtgtcttagaggtaccacagaaggtg
gtactgccctctgatgtgacccgctaccagttggatgggctgcagccaggcactgagtat
cgcctcacgctctacactctgctggagggccgggaggtggccacacctgcaactgtggtc
cccactgggccagagcagcccgtgggcccggtgacagacctacaggcaaccgagctgcct
gggcaacgggtgcgagtgtcctggagcccagttcccggtgccaccgagtaccgcatcact
gtacgcagcatccagggggttgagcggaccctggtgcttcctggaagtcagacagccttt
gacttggatgacgtccgcgctgggctgagctacactgtgcgggtgtctgctcgagttggc
gcccgcgagggtggtgtcagcatcctcactgtccgcagggagccggaaacctcacttgcc
atcccagggctgcgggttgtggcatcagatgcaacgcgagtaagggtggcctggggacct
gttcctggagccagtggatttcgaattagctggaggacagacagtggtccagaatccagc
cagacactgccccgggaatctactgccacagatatcatggggctgcggcctgggacctcc
taccaggtgtctgtgtcagcactgcgagggagagaggagggcccccctgcggtcgtcgtg
gctcagactgacccactgggcccagtgaggaacgtccatatgactcaaactagcagctca
gctgtcaccattgcctggaacaggtttcctggtgccacgggatacaaggtctcctggcgc
tcaggccatggcccagagagatcgcagttggtttctggggaagccacgatggctgaactg
gatgggctggagccaggtactgagtacctggtgcacgtgtgggcccacgtggctggtgtg
gaggggacccctgcttctctggttgtgaagaccgaccctgtgccggtgggcagtgtgtca
aagctgcagatcctgaacgcttccagtgatgttctgcggatcacctgggtgggggtccct
ggagccacagcctacagactggcctggggccagagtgaaggtggccccacgagacaacag
atgctccccggaaacacggactccgcagaaatacggggcctggaaggcggagtcagctac
tcggtgcgagtgactgcactggtcggggaccgtgagggagcacctgtctccattgtcgtc
accacaccgcctgaagttccgccggccctggagacccttcgtgtagtgcagcgaggggag
cactcgctgaggttgcgctggcaaccggtgtccggggcgcacggctaccgtctgcgttgg
cgacctgagggtggccaggaacagtcccgggttctggggccagagctcagcagctatgaa
ctggacgggctggagccagcgaccccataccgcatatggctgagtgtcttgtggccggcc
ggagaagggccccccaccgaagtgactgcatacactgagtcacctcgtgtcccaagcact
gaactacgtgtggtagacacctcagttgactcagtgactctggcctggaccccagtgtct
ggtgtatcaagctacatcctatcctggcggccactaagacgccctggccaagaaatgcct
gggacctcacagacacttccaggaatctcgagctcccagcaggtgacagggctggagcct
ggcatcgactacatcttcaccctgacacccatccgggagggtgtacagggtcctaaggcc
actgtcacacagagcccaatgtgtccccatggcctgatggacgtggtgttcctgctgcac
accactcgggacaatgctgatcgttcagaggctgtaaagcgagctctggggcgtctggtg
tctgcacttgggccccttgggccacatgcagtccaggttggcctcctgtcctacaatcac
cggccctctccgctattcccgctgaacagctcccatgaccctggcgccatcctgcagaag
atccgcgatatcccctacgtggacccaaatgggaacaatctgggcacagccgtgagtgca
gctcacaaatacctgttggcaccagatgctcctggacgccgccggcaagtgccaggggtg
atggttctgctagtaaacgagcccttgagaggtgacatcttcaaccctatccgcgaggtc
caggctgctgggctgaaagtgatgatcctgggcctggtgggagctgacccagaacagctg
cggcgtgtggtgccaggcatgctccctgtccagaccttttttgccgtggatgatggtcca
agcttggatcaggcagtcaatagtttggcaacaatcctgtgtcagccacagacagagcct
tgctcggtgcattgtccaaagggccagaagggggaacctggagagatgggcctgaaagga
caagctgggcctcctggcacccccggcctcccgggcaggatcggtgctcctggcccccag
gggcccccaggaagttccattgcaaagggcgagaggggttaccctggggcaggtggagct
ccaggcagccccggcctccctgggacgcctggaacgcctggcccaaagggctccccaggg
tggcctggctctcctggtgaaccgggagagcgagggcctcgaggcccgaagggggagccg
ggagagcctggacgagtcactgggggtgatggcccagggcttcctgggccgaaaggggac
cctggacctccgggccctcctggatctcatggcccattgggagacccaggaccccgtggt
cccccaggacttcctggaacagctgtgaagggtgacaaaggcgatcgtggggagcggggt
ccccctggaccagatatggacggcagtgctccaggggatcccgggctgccgggtcttcct
ggaagccccggactcccaggcccaattggcccctctggaaagaaaggagaaaagggtgac
tgtgaggatggagccccaggcctcccaggacaacctgggcccccgggtgagcggggccta
cggggacctcctggagacgttggccccaaaggtgaccgaggattgcaaggggctgtaggt
gagacgggagagaagggtgaacgcggatcccctggcccaggaggaccccaggggctgccg
ggagttgctgggcatcctggagtcgagggtcctgaagggccaccaggacccactggccgc
cgaggagagaagggggagcctggccgccctggggatcctgctgtgggacctactggtgct
ggagtcaaaggagagaagggagaggtggggcccactggacccaaaggagctaccggagtc
aaaggggagccaggcccacctggcttggttcttcctggagatcctggcccaaagggagac
cctggaaaccggggccccattggcctcactggcagagcaggacccccaggtgactcaggg
cctcctggagagaagggagaccctgggcggcccggccccgcaggacctatcggcccccga
ggacgagatggtgaagctggagagaaaggtgacgaaggccccccgggtgacccaggtttg
cctggaaaaactggcgagcgtggcattcgggggacacctggagctcggggacctgtgggt
gagaagggagaccagggagaacctggagaggatggacggaacggcagccctggaccagct
ggacccaagggtgaccgtggggacccgggacctccaggaccccctggacgtcaggtggac
acgggacttggagccagagagaagggagagcctggggaccgtggacaggagggtcctcgg
ggacccaagggtgatcccggcacccctggagcctctggggagaggggcattgatggactt
cgggggcccccaggcccacagggggacccaggtgtccgaggcccagcaggagaaaagggt
gacaggggcccccctggcctggatggccgcagtgggctggatgggaaaccaggaacccct
ggcccccctgggcttcatggtgctacaggcaaagctggggacccagggagagatgggctt
ccaggcctccgaggagaacagggacctcctggcccccccggccccactggagcactggga
aagccaggcgaggatggcaagccaggcctgaatgggaaaaacggagaacctggggacccc
ggagaagacgggagaaagggagagaagggagattccggcgcccctgggagagaaggtcac
gatggccccaagggtgagcgtggagctcctggtagccctggactcccgggccccccaggc
cttccagggcaggtcggccctcctggccagggttttcctggtgttccaggaagtctgggc
cccaagggtgaccgcggggacagtggatccaaaggcgaacagggcctccctggagagcgc
ggcctgagaggagaacctgggagtgtgacgaatgtggagcggttgctggaaaatattggc
atcaaggcgtctgccctgcgggagattgtggagacctgggatgagagctcaggcagcttc
ctgccagtgcctgaccggcggcgtggccccaagggggacccaggcgagcggggcccccca
ggcaaggagggacccatcggcttctctggagaccgtgggccaaagggagatcgtggagac
ccaggccctcaggggccacctggcctggcccttggggagaggggctcccctgggcctcct
ggcctggccggggagcctggaaagcctggtattcctgggctcccaggctcggctgggggt
gtgggagagccaggaaggccaggagagaggggagaacggggagagaaaggagaacgcgga
gaacagggcagagatggccctcctggagtccctggcccccccggcccccctggccccaag
gtggctgtagatgagccaggtcctggattccctggactcaagggcgctaagggggatcca
ggcagtgatggcgaccgaggccccaaaggagacaggggtgtgccaggcatcaagggggac
cggggagagcctggacagagtggtcatggtggcagcccgggtctaccaggagagcgcggc
gtggctgggcctgaagggaagccgggtccgcaaggtcccaggggggcccctggcccggcg
ggtggccatggagaccctggaccaccaggtgccccgggtctcgctggcccttcgggaccc
cagggaccttctggcctgaagggggagcctggagagacaggaccaccaggacggggcctg
cctggacctactggacctgtgggacttcctggccctcctggttcttcaggccttgtgggt
cctcagggggcaccaggtttgcctggccaagtgggggagacagggaagccgggagtccca
ggtcgtgatggtgccagtggaaaagatggagacagaggagcccctggtgtaccgggttca
ccaggtctgcccggccctgttggatctaaaggagaacctggacccatgggggcccctgga
caggctgtgatcgggccccctggagcaaagggagagaagggagcccctggaggccttgct
ggagacctggtgggagagccgggagccaaaggtgaccgaggactgccagggccacggggt
gagaagggtgaagccggccgtgcaggggagcctggagaccctggggaagatggttttaaa
ggggctccaggactcaagggtcagaagggtgacccaggaattggggtccagggcccccct
gggcaaactggtcctccaggtctaaagggagagttgggcctccctggtccccccggtgct
cctggtatcgtcgggtttcctggtcagccaggtcttcgaggagagatgggtcagccaggt
gcccctggagagcggggtctggccggccccccagggagagagggagctccaggtcccttg
gggccacctggaccaccagggtcagcgggagcgcctggggcctctggactcaaaggagat
aagggagaccctggagtagggctgcctggggcccgtggcgagcgtggggagccaggtgtc
cggggtgaagatggccaccctggccaagagggacccagaggacttatgggcctcccaggc
ggccggggggaacgtggggagaagggtgaccctggaaccgcagggctgaagggtgacagg
ggtgactcagctgtaattgcggggcctccagggccacggggtgccaagggggacatgggt
gaacgagggcctcggggcacagatggcgaaaaaggacctcggggtgatagtgggatccct
ggagagaagggcaccaagggggaacctggtgacaagggctcagccgggttgctaggagca
cgtggactcacaggacccaagggggagcctggtgctgtaggatttcctggtgacccggga
ttcccaggaaaggatggagcccctggtatccgaggagaaaaaggagatattggcttcatg
ggtccccggggcctcaagggtgaacggggagttaagggagcctgtggcctcgacggagag
aagggagataagggagaagcaggttccccaggtcgcccggggctggcaggacgcaaggga
gatatgggggaaccaggtgtgccaggccagtcgggggcccctggcaaagagggcctgatc
ggtcccaagggtgaccgaggctttgatgggcagtcaggacccaagggtgaccagggcgag
aaaggggagcggggccccccaggaattgggggtctcccaggtcccaagggcaatgaaggc
tctagtggtccccctgggctgcctggcagtgttggtcccaaaggatctgaaggacttcag
ggccagaagggtgagcgaggtccccctggacagagtgtggtaggtgcccctggcacccct
ggggcccctggagagagaggggagcaggggcggccaggacctgctggcccccgtggtgag
aagggagaagctgcgctgacagaggatgacattcggggctttgtgcgtcaggagatgagt
cagcactgcgcctgccagggccagtttatcgcatccgggtcacgacccctccagagttat
gccgcagacactgctggcccccagcgccgcctcgtgcctgtgctccaggtctctcatgca
gacgaggaaggccgggtgccccccgaggatgacgagtatgaatactctgagtattctgtg
gaggactaccaggacccagagactgcttgggatggtgccgacccctgttcgcttccgctg
gatgagggctcctgtactgcctacaccctgcgctggtaccatcgagctgtggcaggtggc
acagagtcctgtcacccctttgtctacggtggctgtggagggaatgccaaccgttttggg
acccgtgaggcctgcgaacgccgctgtccaccccgggtggtccagagccagggaactggt
gctctccagagctga
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