Rhinolophus ferrumequinum (greater horseshoe bat): 117037263
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Entry
117037263 CDS
T07722
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
117037263 (DCAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rfq01001
]
117037263 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117037263 (DCAF1)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117037263 (DCAF1)
Protein kinases [BR:
rfq01001
]
Serine/threonine kinases: Other
Other
117037263 (DCAF1)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117037263 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
117037263
NCBI-ProteinID:
XP_032989032
Ensembl:
ENSRFEG00010017631
LinkDB
All DBs
Position
17:5578338..5653549
Genome browser
AA seq
1510 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVGLRQESKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEIS
FHLDSGHKTSSRVNSATKPEEGGLRKNKSAKQADRESFRKAKQKLGFSSSDPDRMFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLGSHVAVGTTAPSAPTAHPQPRPPQGSLALPGPSYAGNSPLIGRISFI
RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLTRRASFPKYGGVDGGCFDRHLIFSRF
RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQSSMDALNM
DTVCRLYEVGRQRLAEDEDEEEDQKRMEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAEL
EEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSADSSDL
EDDIILSLNE
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcggtacatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaggaacatggcagtgggcaggacatggtaccgatcctcaccaggatgtctgaa
ttgattgaaaaagaaactgaagaatatcgtaaaggggacccagacccattcgatgatcga
catcctggtcgagctgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtgaatgcatatgtgatgacaagccgagagccccct
ttgaacactgcagcttgcagacttctactggacatcatgccagggctggaaactgctgtt
gttttccaagaaaaggaaggaattgttgaaaatcttttcaaatgggcccgagaggctgat
cagccgttgaggacatattctactggattgttgggaggcgctatggaaaatcaagacatt
gctgccaactacagggatgaaaattcacagctggtagcaatagtacttcgaagactacgg
gagctacagcttcaagaagtgggtttgcggcaagaaagcaagcggcccagcccgcggaag
ctctcctctgagccccttctgcctctggatgaggaagctgtggatatggattatggcgac
atggctgtggatgtagtggatggagaacaagaggaagcctctggagacatggagatctcc
tttcatcttgactcaggccacaagaccagtagtagagtgaactcagcaaccaaacctgag
gaaggaggattgaggaagaacaagtcagcaaaacaggctgacagagagagctttaggaaa
gccaagcaaaaattgggtttctcatcatctgatccagatcgcatgtttgttgagctgtct
aatagcagctggtcagaaatgtccccctgggtgattggcaccaattacaccctttatcct
atgactcctgctattgagcaacgacttattctgcagtatttgacccctctaggagaatac
caggagttacttcccatattcatgcaacttggatcacgggagttgatgatgttctatatt
gatctgaaacagactaatgatgtcttgcttacgtttgaggcactcaagcaccttgcatct
ctcctgctccataacaagtttgccacagaatttgtagcacatggtggagtacagaaatta
ctggaaattcctcgtccttctatggctgcaactggtgtatccatgtgcttgtattacctg
tcctacaaccaggatgccatggaaagagtttgcatgcatccccacaatgttctgtctgat
gtggtgaactataccctgtggttaatggaatgttctcatgcctcgggatgctgccatgct
accatgtttttctcaatctgcttctccttccgggccgtgttggagctctttgaccgctat
gatggtctccgtcgtctggtgaacttgatcagtactttggagattctaaatttggaagat
cagggtgcacttctgagtgatgatgaaatatttgctagccgccagactgggaagcatacc
tgtatggccttgcgcaagtactttgaggctcacctggccattaaattagaacaagtaaag
cagtcacttcagaggaccgaaggtggcattcttgtccatcctcaacccccatacaaggca
tgttcgtatactcatgaacagattgtggaaatgatggagtttttgatagaatatggccca
gcacagctatattgggaaccagctgaagtgttcctcaagctttcttgtgtccaactcttg
ttgcagcttatttctattgcctgcaattggaagacctattatgcaaggaatgacactgtg
cgctttgctttggatgtcctggctattcttactgttgtgccaaaaatccagctgcagttg
gcagaatcagtggacgtactagatgaggctggctccacagtctccactgtaggtatcagc
attattttgggagtagcggagggcgagttctttatccatgatgccgaaatccagaaatca
gcacttcagattatcatcaattgtgtgtgtggcccagataaccgaatttccagtattggc
aaatttatctctggaactcctcggaggaagctgccacagactccgaaaagtagcgagcac
accctggccaagatgtggaatgtggtccagtccaacaacggcatcaaggtgctcctctcc
ttactgtccatcaagatgcccatcacagatgcagaccagatccgggccctggcgtgcaag
gccctggtgggcctgtctcggagtagcactgttcggcagatcatcagcaaactgcccctt
ttcagcagctgccagatccagcagctgatgaaggagcctgtgctgcaggacaagcgcagt
gaccacgtcaagttctgcaagtatgcggctgagctcattgaacgggtgtcaggaaagccc
cttctcattggcactgatgtgtccctggcacgactgcagaaagcagatgttgttgcccag
tcaaggatctccttccctgagaaagagctgcttctgttgatacgaaaccatctcatttcg
aaagggcttggggagacagccactgtgctgacgaaagaggctgacctgcccatgactgct
gcctcccattcttctgcctttaccccagtcactgctgctgcttcgcctgtctctcttccc
cgaactcctcgcatcgccaacggcattgcaactcgactgggcagccatgttgctgtgggt
accactgccccttctgcccccactgcccatcctcagccacggcccccccagggttcacta
gctctgcctggcccatcttatgcaggcaactcccctttgattggtaggatcagttttatc
agagagagaccatcaccctgcaatggcaggaaaatcagagtgttgcggcaaaaatcggac
catggcgcctacagccaaagcccagccataaaaaagcagctggacagacatcttccttcc
ccacctacgctggacagtatcatcacagaatatcttagagagcagcatgcacgctgcaag
aacccggttgccacctgcccacctttctctctctttactcctcaccaatgtcctgagcca
aaacagaggcggcaagcgccaataaactttacctcaaggctaacccgcagggcgtcattt
ccaaagtatggcggggtggatggcggatgctttgataggcaccttatctttagcaggttc
cgtcctatttcagtgttccgggaagccaacgaggatgagagtggcttcacctgctgtgcg
ttctcagcccgggagcggttcctgatgcttggcacctgcactgggcagttgaagctctac
aatgtgtttagtggacaggaggaggccagctataactgtcacaactcagccatcacacac
cttgagccttccagggacggatccttgctgctgacatctgctacttggagccagcctttg
tctgcactttggggaatgaaatcagtatttgatatgaagcattccttcacagaagatcac
tatgttgagttcagtaagcactctcaagatcgggtcataggcacaaaaggagatattgct
catatttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgcc
aacaactacaagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgat
ggcgtcctctgggatgtccgctccgcacaggccatccacaagtttgacaagttcaacatg
aatatcagtggtgttttccatccgaatgggctggaggtcatcattaatactgagatttgg
gaccttcgcacttttcatcttttacacacagttcctgctctggatcagtgtcgtgtggtg
ttcaaccacacggggacagtgatgtatggagctatgttgcaggcagatgatgaagacgac
ttaatggaagagaggatgaaaagcccttttgggtcatccttccgcacatttaatgcaact
gactacaaaccgatagcgaccattgatgtgaagcggaacatctttgacctgtgcacagac
accaaagactgctaccttgctgtcattgagaaccaaagcagcatggatgctctaaacatg
gacaccgtgtgccggctgtatgaagtgggccggcagcggctggcggaggatgaggatgaa
gaggaagaccagaagcggatggaggaggaagagcaggaggaggaagatgatgatgaggat
gacgacgacacagacgacctggacgagctggacactgaccagctgctggaggcggagctg
gaggaggacgacaacaatgagaacgcgggcgaggacggggacaacgacttttccccctct
gacgaggaactggcgaacctcctggaggagggagaggacggggaggatgaagactctgac
gcagacgaggaggtggagctgatcctgggggacaccgacagcgcggacagctctgatctg
gaagatgacatcatcttatctctgaatgagtga
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integrated database retrieval system
