Rhinolophus ferrumequinum (greater horseshoe bat): 117037299
Help
Entry
117037299 CDS
T07722
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rfq04040
]
117037299 (SCN10A)
Ion channels [BR:
rfq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117037299 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
CcmD_alt
GPHH
Motif
Other DBs
NCBI-GeneID:
117037299
NCBI-ProteinID:
XP_032989117
Ensembl:
ENSRFEG00010018579
UniProt:
A0A671FXQ7
LinkDB
All DBs
Position
17:13776357..13874470
Genome browser
AA seq
1963 aa
AA seq
DB search
MEFPFGSPETTNFHRFTPESLVETEKRIAAQKAEKKAKGKHSKQEDQEEKPRPQLDLKAC
NQLPKFYGELPEELVGEPLEDLDPFYSTHRTFMVLNKQRTIFRFSATRALWIFSPFNRIR
RTAIKVSVHSWFSSFITVTILVNCVCMTQNDLPEKLECVFTVIYTFEALIKILARGFCLD
EFTYMRDPWNWLDFSVITLAYIGEATDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTAFNETANYSSYEEREWNFC
RGDADFYINKTGTSDLLLCGNGSDAGHCPKGYFCMKTSDNPDFNYTSFDSFAWAFLSMFR
LMTQDSWERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEI
AAKEKKFQEALEMLRKEQEVLAALGIDTASLHSHPGSPLAATNANERRNRMKPNVSEGST
DDSKSHQSEPYNQRRMSFLGLTSGRRRASHGSVFHFRAPARDGSFPDGVIDDAVFLGDRE
SRRGSLLLGGGAGQPRPLPRSPLPQPTNPGSGHGEDGHPTVPTGDLGPGVVDVSAYDAAQ
KTFLSAEYLNEPLQTQRAMSVVSIITSVLEELEESEQRCPPLLTSLAQKYLIWECCPTWV
KLKKLLFRIVTDPFAELTITLCIVVNTLFMAMEHHGMSPIFETMFQIGNIVFTVFFTAEM
VFKIIAFDPYYYFQKRWNIFDCIIVTVSLMELGVAKKGGMAVMRSFRLLRVLKLAKSWPT
LNTLIKIIGNSVGALGNLTMILAIIVFIFALVGKQLLGENYCSQRQSNSSCEELPRWHMY
DFFHSFLIVFRILCGEWIENMWACMQVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSF
SADNLTVPEDDGEMNNLQVALARIQAFAHRTMRALRSYFHRPCLLPRTKVEPQLAVKIPL
SSSKTENHIAADPAMASSGGPSVPRGPSEDQSDFITNPHVWVSVPIAEGESDLDEWEGDE
EEDVRSSPQEVIPPRQEQMQQVRRCEDPLVPRSPCSGRSSEDLAPYLGENWKDKAATQAP
AEGVRDTSSSEGSTVDCLDPEEILRKIPELADDLDEPDDCFTEGCMRRCPCCKVNTTKSP
WAMGWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPKVKSLLEYTDRVFT
FIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKILQYSDIAPIKALRTLRA
LRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGMNFFSGKFGRCINIT
TGDFSPVPPTTVNNESDCRLQNYTGNLFWVNMKVNFDNVAMGYLALLQVATFKGWMDIMY
AAVDARGVNLQPKWENNVYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDVVTRQTFDIIIMVLICLNMITMM
VETDDQSEEKTKVLNKINQFFVAVFTGECVMKMFALRQYFFTNGWNVFDFIVVILSIGSL
VFSTILKSFESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYSIFGMASFPHVKWEAGIDDMFNFQTFANSMLCLFQVTTSAGWDGLLSPILNTG
PPYCDPNLPYNNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTE
PLSEDDFDMFYETWEKFDPEATQFITFSVLSDFADTLCGPLRIPKPNQNILIQMDLPLVP
GDKIHCLDILFAFTKNVLGESGELDSLKTNMEDKFMATNLSKASYEPIATTLRWKQEDIS
AKVIQKAYRSYVFHRSKTISSPPGVPRAEEEAVSLSDEGFIAFMRNENCVLPDKSETVSA
TSFPPSYDSVTRGLSDQVNMSTSSSIQNVDEATSKEATAPGPQ
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccttttgggtccccggaaactaccaacttccatcgattcactccagaatcc
ctggtggagactgaaaagagaattgctgctcagaaggcagaaaagaaagccaaaggtaag
cacagtaagcaggaggaccaagaggagaagcctcggcctcagctagacttgaaagcctgc
aaccagctgcccaagttctacggtgagctcccagaagagctggttggggaacccctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaacagaggacc
attttccggtttagtgccactcgggccctatggatattcagtcctttcaaccggatcaga
agaacagccatcaaagtgtctgtccactcatggttcagttcatttattacagtcactatt
ttggtcaattgtgtgtgcatgacccagaacgaccttccagagaaactggagtgcgtcttc
actgtcatttatacctttgaggccttgataaagatactggcaagaggattttgtctagat
gagttcacttacatgcgagatccttggaactggctagattttagcgtcattaccctggca
tacattggtgaagccacagatctccgagggatctcaggcctgcgcacgttcagagttctt
agagctttaaaaacagtttctgtgatcccagggctgaaggtgatcgtgggggccctgatc
cactcggtgaggaagctggctgatgtgacaatcctcaccatcttctgcctgagtgtcttt
gccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtcaagaattgc
acagctttcaatgagacagccaattactcctcttacgaagaacgcgagtggaatttctgc
cgtggtgacgcagacttctatatcaataagacaggtacttctgatctcttactgtgtggc
aatggatctgatgcaggccactgccctaaaggttatttctgcatgaaaacatctgacaac
ccggattttaactacaccagctttgattcctttgcttgggctttcctctcaatgttccgc
ctcatgacacaggattcctgggaacgactctaccagcagaccctgagggcttctgggaaa
atctatatggtctttttcgtgcttgtcatcttcctggggtctttctacctggtcaatttg
atcttggctgtggtcaccatggcatacgaagaacagaaccaggcaaccattgatgaaatt
gcagccaaggaaaagaagttccaggaggcccttgagatgctccggaaggagcaggaggtg
ctggcagcgctggggattgacacagcctcgctccattcccaccctggatcacctttagca
gccacaaatgccaacgagagaaggaacagaatgaagccaaacgtgtcagagggttccaca
gacgacagcaaatctcaccaatctgagccttacaaccaacgcaggatgtctttcctaggc
ctcacctctgggagacgccgggctagccatggcagtgtgttccatttccgggcccctgcc
cgcgacggttcattccctgatggggtcatagatgatgccgtctttcttggagatcgcgag
agccgtcggggctccctgcttctgggtgggggtgctggccagccacgccccctccctagg
agcccgcttcctcaacccaccaaccctggttcagggcatggagaagatggacaccccaca
gtgcccactggtgatcttggccctggagtcgtggacgtctcggcatatgatgcagcacag
aagactttcttatcagcagaatacttgaatgaacctttacaaacccaaagggcaatgagt
gtggtcagtatcatcacctccgtcctcgaggaactcgaggagtctgaacagaggtgccca
cccttgttgaccagcttggctcagaagtatctaatctgggagtgctgccccacgtgggtg
aagctcaagaagcttctctttaggattgtgacggacccctttgcggagctcaccatcacc
ttgtgcatcgtggtaaacaccctcttcatggccatggagcaccacggcatgagcccaatc
ttcgaaaccatgttccagataggcaacattgtcttcaccgtgttttttactgcggaaatg
gtcttcaaaatcattgccttcgacccctactattacttccagaagaggtggaacattttt
gactgcattattgtcaccgtgagcctgatggagctgggtgtggccaagaagggcggcatg
gcggtgatgcggtccttccgcctgctgcgggttctcaagctggccaagtcctggccaacc
ttaaataccctcatcaagatcatcggaaactcggtcggggcgctggggaacctcaccatg
atcctggccatcattgtctttatcttcgctctggttggcaagcagctcctcggagaaaat
tactgcagccaacggcaaagtaactcctcgtgtgaagaactgccacgctggcacatgtat
gacttcttccattccttcctcatcgtcttccggatcctctgtggggagtggattgagaac
atgtgggcctgcatgcaagtcggccagaaatccatatgcctcatccttttcttgacagtg
atggtgttggggaatctggtggtgctcaacctgttcattgccctgctgctgaactctttc
agtgccgacaacctcaccgtcccagaggacgatggggagatgaacaacctgcaggtcgcc
ctggcacggatccaggcatttgcccatcgcaccatgagggccctgcgcagctacttccac
aggccctgcctgctcccccggaccaaggtggagccccaactggcagtgaaaatcccactc
tccagctccaaaaccgagaaccacattgctgccgacccggccatggcaagctctggaggg
ccatcggttcccagaggccccagcgaggaccagagtgacttcatcaccaatcctcacgtg
tgggtctcggtgcccattgccgagggggagtctgacctcgatgagtgggagggtgacgag
gaggaggatgttcggagctcgccacaggaagtgatcccccccaggcaggagcagatgcag
caagtcagaaggtgtgaggaccccctggtacccaggagcccatgttctggaaggtcctct
gaggacctggctccatacctgggtgagaattggaaagacaaggctgctactcaggcccct
gccgagggcgtgcgtgacacaagctcctcagagggcagcacggtggactgtctggatcct
gaggagatcctgaggaaaattcctgagctggcggatgaccttgacgaaccagatgactgc
ttcacagaaggctgcatgcgccgctgtccctgctgcaaagtgaataccaccaagtctcca
tgggccatgggctggcaggtgcgcaagacctgctaccgcatcgtggagcacagctggttt
gagagcttcatcatcttcatgatcctgctcagcagcgggtccctggcctttgaagactat
taccttgaccagaagcccaaggtgaagtccttgctggagtacaccgacagggtgttcacg
tttatctttgtgttcgagatgctgctcaagtgggtggcctacggcttcaaaaattacttc
accaacgcctggtgctggctggacttcctcattgtgaacatctcactaacaagcctcata
gcgaagatcctgcagtattctgatatagcacccatcaaagcccttcggaccctccgcgcc
ctgcggccactgcgggctctctctcgatttgaaggcatgcgggtggtggtggatgccctg
gtgggcgccatcccttccatcatgaacgtcctcctcgtctgcctcatcttctggctcatc
ttcagcatcatgggcatgaacttcttttcagggaagtttgggaggtgcatcaacatcacc
actggagacttttctcctgtgcctccgactaccgtgaataacgagtctgactgtagactt
caaaactacactggcaacctcttttgggtcaacatgaaggtcaactttgataatgttgca
atgggttaccttgcacttcttcaggtggcaacctttaaaggctggatggacatcatgtac
gcagctgtcgatgcccgaggggtgaacttgcagcccaagtgggagaacaacgtgtacatg
tacttgtactttgtcgtcttcatcattttcggcggcttcttcacactcaatctctttgtt
ggggtcataattgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttc
atgacagaggagcagaagaagtactacaacgccatgaagaagctgggctccaagaagccc
cagaagcccatcccccggcccctgaacaagtaccagggctttgtctttgacgtcgtgacc
agacaaactttcgacatcatcatcatggtgctcatctgcctcaatatgatcaccatgatg
gtggagactgatgatcagagtgaagaaaagacaaaagtcctgaacaaaatcaaccagttc
tttgtggccgtcttcacaggcgagtgtgtcatgaagatgtttgccctgaggcagtatttc
ttcaccaacggctggaatgtgtttgacttcattgttgtgatcctctccattgggagcctg
gtgttttctacaattcttaaatcatttgaaagttacttctcccccacgctcttccgagtc
atccggctggcccggattggccgcatcctcagactaatccgagcggccaagggcatccgc
accctgctctttgccctcatgatgtccctgcctgccctcttcaacattggtctgctgctc
ttcctcgtcatgttcatctactccatcttcggcatggccagcttcccccatgtcaagtgg
gaggctggcatcgatgacatgttcaacttccagaccttcgccaacagcatgctgtgcctc
ttccaggtcaccacctcggccggctgggacggtctcctcagccccatcctcaacacaggg
cccccttactgtgaccccaacctgccctacaacaatggcacaagaggggactgtggtagc
ccagccgtgggcatcatcttcttcaccacctacatcatcatctccttcctcattgtggtc
aacatgtacatcgcagtaattctggagaacttcaatgtggccacggaggagagcaccgag
cccctgagcgaggacgactttgacatgttctatgagacttgggagaagttcgacccagag
gccacccagtttattaccttctctgtcctctcagactttgcagacaccctctgtggtcct
ctgcgcatcccaaaacccaatcagaatatattaatccagatggacctgcccttggtccct
ggagataagatccactgtttggacatcctttttgccttcactaagaatgttttgggagaa
tctggggagttggattctctaaagacaaatatggaggataagtttatggcaactaatctt
tcaaaagcatcctacgagccaatagccaccaccctccggtggaagcaagaagacatttca
gccaaggtcattcaaaaggcctatcggagctacgtattccatcgctccaagacaatctcc
agccctccaggcgtgcccagggctgaggaggaggctgtgtcactctcagatgaaggcttt
attgcattcatgagaaatgaaaattgcgtgctcccagacaaatctgaaactgtatctgcc
acatctttcccaccatcttacgacagtgtcactagaggccttagtgatcaagtcaacatg
agcacatctagctcaatacaaaatgtagatgaagccaccagtaaggaagcaactgcccct
gggccccagtaa
DBGET
integrated database retrieval system
