Rhinolophus ferrumequinum (greater horseshoe bat): 117037579
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Entry
117037579 CDS
T07722
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04390
Hippo signaling pathway
rfq04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
117037579 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
117037579 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117037579 (SOX2)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117037579 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117037579
NCBI-ProteinID:
XP_032989610
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All DBs
Position
2:complement(62841543..62843064)
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AA seq
320 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccacagcggcagcggcgggcggtaaccagaagaacagc
ccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgt
aagatggcccaagagaaccccaagatgcacaactcggagatcagcaagcgtctgggcgcg
gagtggaaacttttgtcggagacggagaagcggccgttcattgacgaggccaagcggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacgctgcctggcgggctgctggccccgggcggcaac
agcatggctagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgcatg
gacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctacccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtataactccatgacaagctcgcagacctacatg
aacggctcgcccacctacagcatgtcctattcgcagcagggcacccctggcatggcgcta
ggctccatgggctcggtggtcaagtccgaggccagctccagcccccctgtggttacctct
tcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtat
ctccccggcgccgaggtgccagagccggccgcccccagcagacttcacatgtcccagcat
taccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcacatg
tga
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