Rhinolophus ferrumequinum (greater horseshoe bat): 117037727
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Entry
117037727 CDS
T07722
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfq04131
]
117037727 (LRBA)
Membrane trafficking [BR:
rfq04131
]
Endosome - Lysosome transport
Others
Others
117037727 (LRBA)
Endosome - Golgi transport
117037727 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117037727 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
117037727
NCBI-ProteinID:
XP_032989977
Ensembl:
ENSRFEG00010005750
LinkDB
All DBs
Position
18:complement(22190964..22766408)
Genome browser
AA seq
2866 aa
AA seq
DB search
MASEDNVPSPPPTGDDGGGGGKGEETSAEEGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKVEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHVPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDLTICSTLLAFIMELLRNSIAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFAKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFIS
TVNIYNAIRRVGTVLLIMHTLKFYYWAVNPQDRSGITPKGLDGPRPNQKEIHSLRAFLLM
FIKQLVMRDSGVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNG
LRVIYKLLASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESLEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFRDHQGTVDEEIEQYSSVQGLSGIS
RDVNVSVGSQQSDTKDSPLSLHVTRNSDEKSSIEKTSSVDSASNIEPQTHDTSNEGGETG
RENQELLDEVPLEETPINETINACDLEVSSDIIEPGTISSDAVKTTGKDTTVSEVSASVS
SPSEEDASEVPELLDKSIVEEEDDEDYVELKVESGPNEEASLPTEIQDNSLSPAPSEASE
RLNILRNDQKLVFQEEEAISEKHTDTETQDSKDSGILTLTASGSSATSPDTSASRTTVQS
DAGQMLEEGKKTTNFARETKLLNDSQGNVFDSPSASEQKIAKLDVSSVATDTERLELKAS
TNVEASQPHQLVLETSRQQEHSGQGIVPDAVNEQRRDSRSVFRIPEFRWSQMHQRLLTDL
LFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLSAA
TSATHELENIEPTQGLSIEASVTFLQRIISLVDVLIFASSLGFTEIEAEKNMSSGGILRQ
CLRLVCAVAVRNCLECQQHSQLKARGDAAKGQKSIHSLIPMGKSAAKSPVDMVTGGISPV
RDFDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRS
QSFKETGSESVNLSLSDVENTPAAFSPLTPASAEESESTSSARRRDSGIGEETATGLGSN
VNVSPPPASPGVSAGPDAISEVLCTLSLEVNKSQETKNDGGNELDNKAAPSVPVSKNVNV
KDILRSLVNIPADGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIIATKKSSVLPS
TLTTNTPTNAVSVVSSVDSAQAPDVGGESPGGRSSNAKLPSVPAVGSVSQDQVSNMSITE
RLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLC
SQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFE
SLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPRE
FWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHGQCANHSLPGAAAADEDILAKGK
QSIKSQPLGNQNSENEILLEGDDDTLSSVDEKDLENLTGPVSLSTPAQLVAPSIVAKGTL
SVTSSELYFEVDEEDPNFKNMDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFM
ANRVAVMFNFPDPATVKKVVNYLPRVGIGTCFGLPQTRRISLASPRQLFKASNMTQRWQH
REISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALN
PKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHAD
RTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWA
KTSEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLNS
ITDPVLREAVEAQIRSFGQTPSQLLLEPHPPRGSAMQVSPLMFTDQAQQDVIMVLKFPSN
SPVTHVAANTQPGLVTPAVITVTASRLFAVNKWHNLPPHQGAVQDQPYQLPVEIDPLVAS
NTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILICGFWDKSFRVYSTDTGKLIQVVFGH
WDVVTCLTRSESYIGGNCYILSGSRDATLLLWYWNGKTSGIGDNPGSGTSAPRAILTGHD
YEITCAAVCAELGLVLSGSKEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIF
YDNGFFCTFSVNGKLQATVETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVCDLRQLFAY
PGCDAGIRAMALSHDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8601 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaatgtcccttccccgccaccaacaggtgatgacgggggaggtgga
gggaaaggagaagaaacctctgctgaagagggtgcattgtccctgaaaccagggctcccc
atcaggggcatcagaatgaaatttgccgtgttgacggggttggttgaagttggagaagta
tccaatagggatattgtagaaactgtctttaacctgttggtaggagggcagtttgatttg
gagatgaatttcattatccaagaaggtgagagtatcatctgcatggtggacctcctagaa
aaatgtgacattacttgccaagcggaagtctggagcatgtttacagccattctgaagaaa
agcatccgaaatcttcaagtctgcactgaagtaggcctggttgaaaaagtgcttgggaaa
gttgaaaaagttgacaacatgatagcagatcttttagttgacatgttgggagtgctggct
agctataatttgacagttcgagaactaaagctattcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctttctgtgttaaagcatgtacctcagaag
tatggtcctgatgcctttttcaactttccaggaaagagtgctgcagctattgcattacct
cctatagccaaatggccataccagaatggtttcacatttcatacctggcttagaatggat
cctgtaaataacatcaatgtggataaggataaaccatatttgtattgtttcagaaccagc
aaaggtcttggttactctgctcactttgttgggggctgtttgattataacgtcaataaaa
tcaaaaggaaaaggctttcagcactgtgtgaaatttgatttcaagccacaaaagtggtat
atggtaactatagtgcacatttataaccgatggaagaacagtgagcttcgatgttatgta
aatggtgagctagcttcctatggagagataacatggtttgtcaacaccagtgataccttt
gacaaatgtttcctgggctcatccgaaacagcagatgctaacagagtattctgtggtcag
atgactgcagtttacctttttagtgaagctcttaacgcagctcagatttttgctatttat
cagttgggcttgggatacaagggtacatttaaattcaaagcagaaagtgacctgttcctt
gctgagcatcacaaacttttattgtatgatggcaaactatctagtgccattgcattcaca
tacaatccacgcgctacagatgcccagctctgcctcgaatcatcccctaaggacaaccct
tcaatttttgttcattctccacatgcactcatgcttcaggatgtgaaggcagttttaaca
cattctatccaaagtgctatgcattcaattggaggagtacaagtgctgtttccgcttttt
gcacagttggattatcggcaatacttatctgatgaggttgacttgactatatgttcaact
ctgctggcttttatcatggagctgttgcggaactcaattgctatgcaggagcagatgctt
gcctgcaagggctttttggtaataggatatagtcttgagaagtcttccaaatcccatgtc
agcagagcagtgcttgaactttgccttgcatttgcaaaatatctgagtaatctgcagaat
gggatgcctctgctcaagcagttgtgtgatcacattcttcttaacccagctatatggatt
cataccccagccaaggtccagttgacactctatacttatctgtccactgagttcattagt
actgtcaacatatataatgccattcggagagttggcacagtgcttctcatcatgcatacg
ctgaaattttactactgggcagtgaaccctcaggatcgaagtggcatcacccccaaagga
ttagatggaccacgacctaatcagaaagaaatacattctctaagagcgttcttattgatg
ttcattaaacaattagtgatgagggattctggagtaaaggaagatgaactacagtccatt
cttaattacctgctcactatgcatgaggatgacaatctaatggatgtcctacagttgctt
gttgcattaatgtcagaacatccaagctctatgatacctgcttttgaccaaagaaatggg
ttacgtgttatctataaactgctggcatcaacaagtgaaggaatcagagtacaagctctc
aaggcaatgggatattttttaaaacacctggccccaaaaaggaaagctgaagtcatgctt
ggacatggattgttttcgttgctcgctgaaagactcatgcttcagacaaatttgatcaca
atgaccacatataatgtcttgtttgagattctaatagaacagatttgtacgcaagtgata
cataaacagcatccagatcctgattcttcagtaaagatacaaaatcctcagatactaaaa
gtaattgcgaccctacttcgaaattctcctcagtgcccagagagcttggaagttcgcaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacagaaggagcttg
ctgcaatgttctgtgtggcaagagtggatgctttctctctgctattttaatcctaagaat
tcagatgagcaaaagataacagaaatggtatatgccatattcagaatcctgctttaccat
gcagtcaaatatgaatggggtggctggcgtgtgtgggtagacactttatcaattacacat
tcaaaggttacttttgaaatacacaaggaaaaccttgccaatatatttagagaccaccag
ggaactgttgatgaagaaatagagcaatattcttcagttcaaggactctctggcattagc
agggatgtaaatgtttcagtaggatctcagcagtcggatacgaaggattctcccttgtct
cttcatgtcaccagaaatagtgatgaaaagtcaagtattgagaagacaagttcagtagac
tctgcatccaacattgaaccacaaactcatgatacatctaacgaaggaggggaaactggg
agagaaaatcaggagttactggatgaagtccctttagaagaaacacctataaatgaaaca
attaatgcatgtgatttagaagtatcttctgacataatagaacctgggaccatttcttct
gatgctgtgaaaacaactggaaaagatacgactgtcagtgaagtaagtgcttctgtaagt
tctccttcagaagaggacgcttcagaggtaccagaattattggataagtctatagtagag
gaagaagatgatgaagattatgtagaactcaaggtagaaagtggtcctaatgaagaagcc
agtctacccacagagatccaagataatagtttgtctccagctccaagtgaagccagtgaa
agactcaacatacttcgtaatgaccaaaaattagtatttcaagaggaggaagccataagt
gagaagcacactgatactgaaactcaagattctaaagattccggaatcttgactctgaca
gcgtcagggtcttcagctacctcacctgacacttcagcctcccgaacaactgtacaatca
gatgctggtcagatgctggaggaagggaagaaaacaactaactttgctagagaaaccaaa
ttattgaatgattctcagggtaatgtcttcgactctcctagtgcttctgagcagaagatt
gcaaagttggatgtttccagtgttgccacagatactgaaagactggaattgaaggccagt
acaaatgtggaagcatctcagcctcatcaacttgtgcttgagacgtcaaggcaacaggag
cactcagggcaaggaatagtcccagatgccgttaatgagcaaaggagggattccagatct
gtgtttcgtattcccgagttcagatggtctcaaatgcatcaacgattgctcactgatctg
ttattttcgatagaaacagatatacaaatgtggagaagccattcaacaaagacagttatg
gacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcatctcatctct
caagtgatggacaatatggtcatggcttgtgggggtatactgccattgctttcagctgct
acatcggctacacacgagctggaaaatattgaacccactcaaggcctttcaatagaagcc
tctgtgacatttttgcaaaggataatcagtcttgtggatgtgcttatatttgcaagttct
cttggctttactgaaattgaagctgaaaaaaatatgtcatcgggaggaattttacggcag
tgtcttcgtttagtgtgtgcagtggcagtaaggaattgcttagagtgtcagcagcattca
caactgaaagctagaggagatgcagcaaaaggccagaaatcaatacatagcctgattcct
atggggaagtctgcagcaaagagtccagtggacatggtgactggaggtatatctccagta
agagattttgacaggctcttacaagacatggatattaatcgccttagggcggttgtcttc
agagacatcgaggatagcaaacaagctcaatttttagccttggcagttgtatattttatc
tctgttcttatggtctcgaagtacagagatattttggaaccccagaatgaaaggcgtagc
cagtcatttaaggaaactggtagtgaaagtgtgaatttatcactctctgatgtagaaaac
acaccagcagcatttagcccgttaactccagcatcagcggaagaatctgaaagcacatca
tctgcccgaaggagggactcaggcattggggaggaaacagctactggcttaggaagcaac
gtgaatgtatctccccctccagcctctccaggggtcagcgcaggcccagacgccatcagt
gaggtgctatgcactctttctttagaagtcaataaatctcaggaaaccaaaaatgatggc
ggaaatgagttggataacaaggctgcaccatcagttccagtttcaaaaaatgtcaacgta
aaggacattctccgaagcttggttaacataccagcagatggagtcacagtggatcctgcc
cttctgcccccagcctgccttggagctcttggcgatctgtctgtggaacaacctgtgcag
ttcagatcttttgacagaagtgtcatcattgcaacaaaaaaatcatcagtcttaccttcc
acacttactacaaatacgcctaccaatgctgtcagtgtggtttcttcagtagattcagcc
caagccccagatgtgggaggagaatcacctggtggtagatcatctaatgcaaaattgcct
tcagttccagcagttggttcagtttcacaagaccaagtttccaatatgagtattacagag
aggcttgaacatgctttggaaaaggcagctccccttctgcgagaaatttttgtggatttt
gcaccttttctttctcggacacttttgggtagccatggacaagaactgcttatagaagga
acaagtctggtttgcatgaagtccagtagttcagttgtggagttggttatgctactatgt
tcacaggagtggcagaattctattcagaagaatgcaggccttgcttttattgaactcgtc
aatgaaggaaggttgcttagccaaacaatgaaggatcatctagtaagagtagcaaatgaa
gctgaatttatcctgagcaggcagcgagcagaagatattcacagacatgcggaatttgag
tcactgtgtgcccagtattctgctgacaaacgagaagatgagaagatgtgtgatcatttg
ataagagcagctaagtatcgagaccatgtgacagcaactcaactaatccagaaaattatc
aacattctcacagacaagcatggagcctggggaaattctgcagtaagtcgtcctcgtgag
ttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaac
cctctaggatcgacacatcctgaagcgaccctaaaaacagccgtggaacacggtcagtgt
gcaaaccactccttgccaggagcagcagctgcagatgaagatattcttgctaaaggaaaa
cagtccatcaagagtcagcctttaggaaatcagaactcagaaaacgagatcctcctggaa
ggcgacgacgatactctgtcatccgtggatgagaaagatctagagaatctcactggtcct
gttagcctgagcacaccagctcagcttgtggccccctctattgtggcaaaaggcactctt
tctgtcacctcctccgaactctatttcgaggtagatgaagaggaccccaacttcaagaat
atggaccccaagatcctggcatatacagaagggcttcatggaaaatggctgttctcagag
ataagatcaatcttttctcgtcgttatcttctgcaaaatacagccctggagatctttatg
gcaaacagagttgctgtaatgttcaacttcccagaccctgcaacagtaaagaaagtggtg
aattacctacctcgtgttggtattggaacttgttttggattgcctcaaaccaggcgtata
tcattagctagtcctcgtcaactttttaaagcttctaatatgacccagcgatggcaacac
agagagatttcaaattttgagtacttgatgtttctcaacacaatagcaggacggacttac
aatgacttaaatcagtatccagtgtttccatgggtcatcactaattatgaatcagaagaa
ttggaccttaccttgccaagtaacttcagagatttatccaagccaataggtgctttgaat
ccaaagagagcagcattctttgcagaacgttatgaatcatgggaagacgatcaagttcca
aagttccactatggtactcattactcaactgcaagttttgttcttgcatggctgctaaga
atagaacctttcacaacttatttcctaaatttgcaaggagggaaatttgatcatgcagat
cgaactttttcatcaatttccagagcttggcgaaatagtcagcgtgatacatctgatatt
aaggagttgattcctgaattttattatctccctgagatgtttgtcaacttcaataattac
aatcttggagtgatggatgatgggacagtagtgtctgatgttgaacttcctccttgggcc
aaaacctcagaagaatttgttcgcataaacagattggccctggagagtgaatttgtttcc
tgccaacttcaccagtggattgatctcatttttggctataaacagcaaggaccagaggct
gttcgatccctcaatgtgttctattacctgacctatgaaggagctgtcaacctgaattca
ataactgatcctgttttgagagaggctgttgaagctcaaatccgaagttttggacagacg
ccttctcagctcctcctagagcctcaccctccccgaggttccgccatgcaagtgagtccg
ttgatgttcacagaccaggcccagcaggacgtcatcatggtcctgaagtttccgtccaac
tcccctgtcacccacgtggcagccaacacccagcccggcctggtcactcccgccgtgatt
acggtcaccgctagcaggctattcgccgtgaacaagtggcacaaccttcctcctcatcaa
ggtgctgtacaggaccagccataccagctgccagtggaaatcgatcctctcgtagccagc
aacacaggaatgcacaggaggcaaatcactgaccttttagaccaaagtattcaagtccat
tcccagtgcttcgtcatcacatcagacaaccgttacattctcatctgtggcttctgggat
aagagtttccgagtctattctacagacacaggaaaattgatccaagtggtgtttggccat
tgggatgttgtcacttgcctcactcgttctgagtcttacattggaggaaattgctacatt
ctctcagggtcacgtgatgcaacccttctgctctggtactggaatggaaaaaccagtggg
attggagataacccaggaagtgggaccagcgctccccgggccattctgacaggccacgac
tatgagatcacttgtgctgccgtctgcgctgagctgggcctggtgttaagtggctccaaa
gaaggaccatgtctcatacattccatgaatggagatttgttaaggactttggagggtcct
gaaaactgcctgaaaccgaaactcattcaggcttcaagagagggtcactgtgtcatattc
tatgacaatggcttcttctgtacattcagcgtgaatggaaaactccaggctaccgtggag
acagacgataacataagggccatccagctgagccgggacgggcagtacctgctcacagga
ggagacaacggcgtggtcatggtctggcaggtgtgcgacctcaggcagctgtttgcctac
ccgggctgcgacgctgggatccgggccatggccctgtctcatgaccagagatgcatcatt
tctggcatggcctcaggaagcatcgttctcttctacaatgactttaaccggtggcatcac
gagtatcaaacccgctactga
DBGET
integrated database retrieval system
