Rhinolophus ferrumequinum (greater horseshoe bat): 117037799
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Entry
117037799 CDS
T07722
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117037799 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117037799 (XAB2)
03041 Spliceosome [BR:
rfq03041
]
117037799 (XAB2)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117037799 (XAB2)
Spliceosome [BR:
rfq03041
]
Complex B
Other components
Prp19-related factors
117037799 (XAB2)
Complex C
117037799 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
TPR_15
ARM_TT21_C
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
117037799
NCBI-ProteinID:
XP_032990162
Ensembl:
ENSRFEG00010010529
UniProt:
A0A671EW03
LinkDB
All DBs
Position
18:complement(56676485..56689666)
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AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDPVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETSSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEVYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQNKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggctcggctctcgcggcccgagcggccggaccctgtgttcgatgaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctcagtcaaatgctggctccgc
tatatcgagttcaaacagggggccccgaagcccaggcttaatcagctgtacgagcgggcg
ctgaagctgctgccctgcagctacaaactctggtaccggtacctgaaggcacgccgggca
caggtgaagcatcgctgtgtgactgaccctgcctatgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacgtctgtggctggattattgccagttcctg
atggaccagggccgcgtcactcacacgcgtcgcactttcgaccgcgccctccgggcgctg
cccatcacacagcactctcgtatttggcccctgtacctgcgcttcctgcgctcacaccca
ctgcctgagacagccgtgcggggctaccggcgcttccttaagctgagccccgagagtgca
gaggagtacatcgagtacctcaagtcgagcgaccggctggatgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgcttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgcgacctcatctcccagaacccagacaaggtgcagtcactcaacgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggctgactactacatccgcagtggccatttcgagaaggctcgggacgtgtatgag
gaggccatccggactgtgatgaccgtgcgggacttcacccaggtgttcgacagctatgcc
cagttcgaggagagcatgattgcagctaagatggagacctcctcagagctggggcgggag
gaggaggacgacgtggacctggagctgcgcctggcccgcttcgagcagctcattagccgg
cggcccctgctcctcaacagcgtcctcctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gccgtgcagacggtggaccccttcaaggctaccggcaagccccacacgctgtgggtcgcg
tttgccaagttctatgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggcgagcgtgtggtgtgagtgtggc
gagctagagctccggcacgagaattacgaccaggccttgcggctgctgcggaaggcaaca
gcgctgcctgcccgccgggccgagtacttcgatggctcggagcccgtgcagaaccgcgtg
tacaagtcactgaaggtgtggtccatgctcgccgacctagaggagagccttggtaccttt
cagtccaccaaggccgtgtacgaccgcatcctggacctgcgcatcgccacgccgcagatc
gtcatcaactacgccatgttcctggaggagcacaagtatttcgaggagagcttcaaggca
tacgagcgcggcatctcgctgttcaagtggcccaatgtgtccgacatctggagcacctac
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggcacgggacctcttt
gagcaggcgctggatggctgcccccctaaatatgcaaagaccctgtacctgctgtatgca
cagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgggccacc
cgggctgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggcagct
gaggtctacggggtcacccacacccggggcatctaccagaaggccatcgaggtgctgtct
gacgagcacgcccgggagatgtgcctgcggtttgcggacatggagtgcaagctgggggag
atagaccgtgcccgggccatctacagcttctgctcccagatctgcgacccccggacgacc
ggggccttctggcaaacgtggaaggacttcgaggtccggcatggcaacgaggacaccatc
cgcgagatgctgcgtatccgccggagcgtgcaggccacctacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctcgcc
cccgggcagagtggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg
gccgaggccgagcgtgaccagccttcgagggcccagaacaagatcttgtttgtgaggagc
gacgcgtcccgggaggagctggctgagctggcgcagcaggccaacccagaggagatcgag
ctgggtgaggacgaggacgaggatgagatggacctggagcccaatgaggtgcggctggag
cagcagagcgtgccggctgccgtgttcgggagcctgaaggaagactga
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