Rhinolophus ferrumequinum (greater horseshoe bat): 117037859
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Entry
117037859 CDS
T07722
Symbol
SAMD1
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117037859 (SAMD1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117037859 (SAMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
PTPRCAP
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
117037859
NCBI-ProteinID:
XP_032990254
Ensembl:
ENSRFEG00010009981
LinkDB
All DBs
Position
18:47912069..47915259
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AA seq
533 aa
AA seq
DB search
MAGPPALPPPETAAAATTAAATSSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGGPA
AAPPPTPAQPPAPAPVAAAAPARAPRSAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPP
APPAVAPPAGPRRPPPPAVAAREPPLPPPPQPPAPPQQQQPPPPPPQQQPEGGAARAGGP
ARPVSLREVVRYLGGSGGASGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGR
APPASSARASRSKRGGEERMLEKEEEEDDDEDEDEEDDVSEGSEVPEGDRPAGAQHHQLN
GERGSQGAKERVKEWMPGVTHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGSVSAATGPDS
PSPVPLPPGKPALPGADGTPFGCPSGRKEKPADPVEWTVMDVVEYFTEAGFPEQATAFQE
QEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFLG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctacctcgtcgtccgccgcttccccgcactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccgccgcgcgccccccgcgggggccccgcc
gccgcgccgccgcccacgcccgcccagccgccagcgcccgcgcccgtcgctgccgccgcc
ccggcccgggcgccccgctcggccgccgccgccacagcgcccccctcacccggccccgcg
cagccgggcccccgcgcgcagcgggccgcgcccctggccgcgccgccgcccgcgcctcct
gctccgccggcagtggcgcccccggccggcccgcgccgcccccccccgcccgccgtcgcc
gcccgggagccgccgctgccgccgccgccacagccgccggcgccgccacagcagcagcag
ccgccgccgccgccgccacagcagcagccggaggggggcgcggcgcgggctggcggcccg
gcgcggcccgtgagcctgcgggaagtcgtgcgctacctcgggggcagcggcggcgccagc
ggccgcctgacccgtggccgcgtgcaggggctgctggaggaagaggcggcggcgcggggc
cgcctggagcgcactcgcctcggagcgctcgcgctgccccgcggggacaggcccggacgg
gcgccgccagcctccagcgcccgcgcgtcgcggagcaagagaggtggagaagagcgaatg
cttgagaaggaagaagaggaagatgatgatgaagatgaagatgaggaagacgatgtgtct
gaaggctcagaggttcctgagggtgaccgtcctgcaggtgcccagcaccaccagcttaat
ggcgagcggggctctcagggtgccaaggagagggttaaggagtggatgcccggtgtaacc
caccagggccaggatgaagggcgagggccagcgccaggcagtggcacccgccaggtgttc
tccatggcagccatgaataaggaagggggatcagtctctgctgccactgggccagactcc
ccatcccctgtgcctttgcccccaggaaaaccagccctgcctggggccgatgggacccct
tttggctgtccttctgggcgcaaagagaagccagctgaccctgtggagtggacggtgatg
gatgtggtagagtatttcacagaggctggcttccctgagcaggcaacagctttccaagag
caggaaattgatggcaagtctctcctgctcatgcagcggacagatgtgctgacgggcctg
tccatccgccttggcccagccttgaaaatctatgagcaccatatcaaggtgctccagcaa
ggccactttgaggacgatgaccctgatggctttctaggctga
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