Rhinolophus ferrumequinum (greater horseshoe bat): 117038013
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Entry
117038013 CDS
T07722
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
rfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117038013 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
117038013 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117038013 (PABPC4L)
03041 Spliceosome [BR:
rfq03041
]
117038013 (PABPC4L)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117038013 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
117038013 (PABPC4L)
Spliceosome [BR:
rfq03041
]
Complex C
Other components
Complex C specific factors
117038013 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_Nup35
RBD_DEAH11
RRM_10
Nup35_RRM_2
RRM_3
RRM_MARF1
RBD_RDR6
DUF4523
RRM_YTH1
SNaCT8
Motif
Other DBs
NCBI-GeneID:
117038013
NCBI-ProteinID:
XP_032990495
Ensembl:
ENSRFEG00010011483
UniProt:
A0A671EUM9
LinkDB
All DBs
Position
18:complement(11985869..11987738)
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AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLH
LADAQKALDTMNFDMIKDKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSRGYAFVHFQNQTAADRAIEEMNGALLKDCRLFVGRFKNRKDREA
ELQNKAHEFTNVYIKNFGDDMDDERLKEVFSQYGKILSVKVMTDSNGKSKGFGFVSFDSH
EAAQKAVEEMNGKDISGQLLFVGRAQKKAERQAELKQMFEQMKQERYRRSRGVKLYIKNL
DETIDDEQLRREFSSFGSINRIKVMQEEGRSKGFGLICFSSPEEAAKAMAEMNGRILGSK
PLNIALAQRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgccaggcctccctgtatgtgggcgacctccatgctgat
gtcaccgaggacctgctgttcaagaagttcagcgctgtgggaccagtgctgtccatccgc
atctgcagggacctggtcacccgtcgctctctgggctacgcctacgtgaacttcctgcac
ctggccgatgcccagaaggccctggacacaatgaactttgacatgataaaagacaaatct
atccggctcatgtggtctcaacgcgacgcctacttaaggaaatctggaattgggaacgtg
ttcatcaagaatctggacaaatccattgataacaaaacgctttacgaacatttttctgct
tttggaaagatcctgtcctccaaggtgatgagtgacgatcaaggatcgagaggctacgcg
tttgtgcactttcagaaccagactgctgcagacagggccattgaggagatgaatggggcc
ctgctgaaggactgcaggttgtttgttggcagattcaaaaaccgcaaagatcgggaggcc
gagctccaaaataaagcccatgaatttaccaatgtttacatcaaaaactttggagatgac
atggatgacgagagactgaaggaagttttcagccaatatggcaaaatcctgagcgttaag
gtgatgacagattccaatggaaaatccaaaggctttggctttgtgagttttgatagccac
gaggctgcccaaaaggctgttgaagaaatgaatgggaaggacataagtggacagctgctt
tttgtaggccgtgcgcaaaagaaagcagaacgacaggctgagttaaagcaaatgtttgaa
cagatgaaacaggagagatacaggcggtcccggggagtgaagctctatattaagaacctg
gatgaaaccattgatgatgaacaactaaggagggaattttcttcatttggatcaattaac
agaattaaggtaatgcaagaagaaggacgaagcaaagggtttggcttgatctgcttctcc
tctccagaggaggccgctaaagcaatggctgagatgaatggccgcatcttgggctccaag
ccactcaacatcgccctggcccagaggccctag
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