Rhinolophus ferrumequinum (greater horseshoe bat): 117038100
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Entry
117038100 CDS
T07722
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
117038100 (MED16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117038100 (MED16)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
117038100 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_EML_2
DPBB_PEX6
ASA1
Motif
Other DBs
NCBI-GeneID:
117038100
NCBI-ProteinID:
XP_032990643
Ensembl:
ENSRFEG00010016516
LinkDB
All DBs
Position
18:62033859..62047765
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AA seq
841 aa
AA seq
DB search
MDLAYVCEWEKWPKSTHCPSVPLACAWSCRNLIAFTTDLRNDDQDLTRLIHILDTEHPWD
VHSINSGHSEAITCLEWDQSGSRLLSADANGQIKCWSMADHLANSWESSVGSLVEGDPIV
ALSWLHNGVKLALHVEKSGVSSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSL
LKPSGQVLTSTESLCRLRSRVALADIAFTGGGNIVVATADGSSACPVQFYKVCVGVVSEK
CRVDTEILPSLFMRCTTDPNRKARFPAVTHLKFLARDMSEQVLLCASSQTSSIVECWSLR
KEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVAS
DTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSVATRAVDEPAIKRPRTTGPAVHFK
AMQLSWTSLALVGIDNHGKLSMLRISPSMGHTLDMGLALRHLLFLLEYCMVTGYDWWDIL
LHVQPAMVQSLVDRLHEEYTRQSATLQQVLSTRILAMKASLCKLSPCTVTRVCDYHAKLF
LIAVSSMLKSLLRPHILNTPDKSPGDRLTEICTKITDVDIDKVMINLKTEEFVLDMNTLQ
ALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSC
LPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPNLDWL
PVSDGLVSRLQPKQPLRLHFGKAPTLPGSATTLQLDGLIRALTPSGLPSPARAPGQPKMD
HLRRLHLGAYPTEECKACTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWRRMALSC
P
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatctggcttatgtctgcgagtgggagaaatggcccaagagcacccactgcccatca
gtgcccctggcgtgcgcctggtcctgccgcaacctcatcgccttcaccacagacctccgg
aacgacgaccaggacctgacccgactgatccacatcctggacacggagcatccctgggat
gtgcactctatcaactcagggcacagcgaggccatcacctgccttgagtgggaccagtca
ggctcccggctactgtcagctgatgccaacggacagatcaaatgctggagtatggcggac
catctggccaacagctgggagagctctgtgggcagcctggtggaaggggaccccattgtg
gccctgtcctggctgcacaacggtgtgaagctggcactgcacgtggaaaagtcaggagtc
tccagcttcggggaaaagttctcccgtgtcaagttctcgccgtcgctaacgctgtttggg
ggcaagcccatggagggctggatcgcagtgacggtcagtggcctggtcaccgtgtcccta
ctcaagcctagcgggcaggtgctaacgtcgacagagagcctgtgccggctgcgcagccgt
gtggccctggctgacattgccttcacgggtggtggcaatatcgtggtggccacggcggat
ggcagcagcgcctgccccgtgcagttctacaaggtgtgtgtgggcgtggttagcgagaag
tgccgtgtggacactgagatccttccctcgctgttcatgcgctgtaccaccgatcccaac
cgcaaggccaggttccctgccgtcacccacctcaagttcctggcccgtgacatgtcagag
caggtgctcctgtgcgcatccagccagacgagcagcatcgtggagtgctggtccctgcgg
aaagaggggctccctgtgaacaacatcttccagcagatctctcctgtggttggtgacaag
cagcccatgattcttaaatggaggatcttgtcggccaccaatgacttggaccgggtatct
gctgtggcactgcccaagctgcccatctcactcaccaacactgacctgaaggtggccagc
gacacgcagttctaccctggcctcgggctggccctggccttccatgatggcagcgtccac
attgtgcaccgactgtcactgcagaccatggctgtcttctacagctctgtggccacacgt
gccgtggatgagccagccatcaagcgccctcggaccacgggtcctgccgtccacttcaag
gccatgcagctctcctggacctccctggcccttgtgggcatcgacaaccatgggaagctg
agcatgctccgcatctcgccttccatgggccacactctggacatgggcctggccctgcga
cacctgctattcctgctggagtactgcatggtgactggctacgactggtgggatatcctg
ctgcacgtgcagccggccatggtgcagagcctcgtggacaggctgcacgaggagtacaca
cgccagagcgccaccttgcagcaggtcctctccacccggatcctggcaatgaaggcctcc
ctgtgcaagctgtcgccctgcacggtgacccgcgtgtgcgactaccatgccaagctcttc
ctcatcgctgtcagctccatgctcaagtccctgctgcgtccacacatcctcaacacgccc
gacaagagtcccggcgaccggctgaccgagatctgcaccaagatcacggatgtcgacatc
gacaaggttatgatcaacctcaagacagaagagtttgtgttagatatgaacacgctgcag
gcgctgcagcagctcctgcagtgggtgggtgacttcgtgctctacctgctggccagcctg
cccaaccagggctctccactgcggccgggccacagcttcctgcgggacggcacctcgctg
ggcatgctgcgggagctgatggttgtcatccgcatctggggcctgctgaagcccagctgc
ctgcctgtgtacacagccacctccgacacccaggacagcatgtccctgctcttccgtctg
ctcaccaagctctggatctgctgccgtgatgagggccccacgagcgagccagacgaggct
ctcgtcgatgaatgctgcctgctgcccagccagctgctcatccccaacctggactggctg
cctgtcagcgacggcctggtcagccgcctgcagcccaagcagcccctgcggctgcacttt
ggcaaggctcccactctgcctggcagcgccaccaccttgcagctggatggcctcatcagg
gccctgacgccctccggtctcccctcgcctgccagggcaccgggccagcccaagatggac
cacctgcggaggctgcatctgggcgcctatcccacggaggagtgcaaggcctgcaccagg
tgtggctgtgtcaccatgctgaagtcacccaacaagacaacggccgtcaagcagtgggag
cagcgctggatcaagaactgcctgtgtggggggctgtggcggcggatggccctcagctgc
ccctga
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