Rhinolophus ferrumequinum (greater horseshoe bat): 117038341
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Entry
117038341 CDS
T07722
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117038341 (MEX3D)
04121 Ubiquitin system [BR:
rfq04121
]
117038341 (MEX3D)
Enzymes [BR:
rfq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117038341 (MEX3D)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117038341 (MEX3D)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117038341 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-RING_4
RING_XB3-XBAT31
zf-C3HC4
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
117038341
NCBI-ProteinID:
XP_032991150
LinkDB
All DBs
Position
18:61528067..61536535
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AA seq
631 aa
AA seq
DB search
MPGSVGQPDGGGGAACGDPSPCPPPPSAPEGAEEAAPAPRPPPEPDDAAAALRLALDQLS
VLGLGGAGGRDEEGMAADGGDGGAAAEPAPPDRSEVAVAPGPLPEPDVSPPPPRPSPPDV
FAGFAPHPAALGPATLLAEQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALR
AKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSVIRATRSKAGGLPGAAQG
PPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPEN
VDRAREEIEAHITLRTGAFTDAGPDSDFHANGTDVCLDLLGAAAGLWSKTPNPGRRPPVP
TASLRGDSALGAPGGVEAFYPGSRGGPPVPDTGPTSPYGGSGNGGFTFGGDGPGAPSGPP
APEDCDFGFDFLALDLTVPAAATIWAPFERTAPLPAFSSCSAVNGAPAPPTPGVRRSSGA
GTPRHSPTLPEPSGLGLELPLARRTAPDPVGALPWRPAQGSLSSFSSSGSFSTATSLPSS
SSASSCPSLDSSTSESRKPSATACSGSAAPASAPALARECVVCAEGEVMAALVPCGHNLF
CMDCAVRICGKSEPECPACRTPATQAIHIFS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccgtcggccagcccgacggcggcgggggcgcggcctgcggcgaccccagc
ccgtgccccccgccgccgtccgcgcccgaaggcgctgaggaggccgcgcccgcgccccgg
ccgccgcccgagcccgacgacgcggccgctgcgctgcgcctggcgctggaccagctctcg
gtgctggggctgggcggcgctggcggccgcgacgaggaggggatggccgcggacggcggg
gacggcggggccgctgccgagcctgcgcccccggacaggtccgaagtggccgtggccccg
ggcccgctgccggaacccgacgtgagccccccgccgccccggccgtcgccgcccgacgtg
ttcgcgggctttgcgccccaccccgcagccctgggccccgcgacactgctggcagagcag
atgagcgtgattggcagccgcaagaagagcgtgaacatgaccgagtgcgtgccggtgccc
agctccgagcatgtcgccgagatcgtggggcgccaggggtgcaagatcaaggctctgcgt
gccaagacaaacacatacatcaagactccagtgcgcggggaggagcctgtcttcatcgtg
actggccggaaggaggacgtggagatggccaagcgtgagatcctgtcggccgccgagcac
ttctccgtcatccgcgccactcgcagcaaggccggcgggctgcccggcgcagcacagggc
ccacccaacctcccgggacagaccaccatccaggtgcgcgtgccctaccgcgtggtgggg
ctggtggtggggcccaagggcgccaccatcaagcgcatccagcagcggacgcacacatac
atcgtgacgccagggcgtgacaaggagccagtgttcgccgtgacaggcatgcctgagaac
gtggaccgggcacgcgaggagatcgaggcacacatcacgctgcgcaccggcgccttcacc
gacgcaggccccgacagcgacttccacgctaacggcaccgacgtctgcttggacttgctc
ggggcggctgcgggcctctggtccaagacccccaacccagggcggcggccccccgtaccc
acagccagcctccgtggggacagtgccctgggtgccccggggggagtcgaggccttctac
ccgggcagccgtgggggaccaccggtgccagacacgggccccaccagtccctacggtggt
tcaggtaacgggggtttcacctttggcggcgacggcccgggggccccctcggggcccccc
gctcctgaggactgtgactttggcttcgacttcctggcgctggacctgacagtgcctgcg
gcagccaccatctgggccccctttgagcgcactgcgcccctgccggccttcagcagctgc
tcagcggtcaacggggcccccgcaccacccaccccaggtgtccggcgcagcagtggggct
ggcaccccgcgacactcccccacgctgcccgagcccagcggcctgggcctggagcttccg
ctggcccgccgcaccgcacctgacccggtgggcgccctgccttggaggcccgcgcagggc
tccctctcatctttctcaagtagtggcagcttttccacggccacctctctgcccagcagc
tcctcggcctcctcatgcccctccctggactccagcacctccgaaagccgcaagccctca
gccacagcgtgctccgggtctgcggccccggcctccgccccagccctggcgcgggagtgc
gtggtatgcgccgagggcgaggtgatggcagcgctggtaccttgcggccacaacctcttc
tgcatggactgcgccgtgcgcatctgcggcaagagcgagcctgagtgccccgcctgccgc
acgcccgccacccaggccattcatatcttttcctag
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