Rhinolophus ferrumequinum (greater horseshoe bat): 117038539
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Entry
117038539 CDS
T07722
Name
(RefSeq) tripartite motif-containing protein 60-like
KO
K12029
tripartite motif-containing protein 60/61
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117038539
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117038539
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
RING_XB3-XBAT31
DUF5447
Sina_RING
TRAF3_RING
CCDC92
zf-rbx1
End3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117038539
NCBI-ProteinID:
XP_032991383
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Position
18:46079222..46080643
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AA seq
473 aa
AA seq
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MEFVSALADFQAEASCPICLDFLKDPVTINCGHNFCLSCINMSWKDLTDTFPCPFCRFCC
LERKFASNLQLGNLAEIAKLLQIRRSKRKRQEEKFVCEKHNQVLTFFCQKDLEVLCPRCS
FSTDHRNHYIWPIEKAARYHRERLEYCIEPWKERVEQVEKVITMQTRKSVELKKKVEYRR
EEIRSEFEQLMLFLQNEQETVLRELQDEETAILTKLNDNLTKFSDHVSTLKCLLKEIESK
YVKSELEFLTDVKSIYHRYKTLKAPEPFSFQLKEYGYHLPPQYSGLNKIIKQFQVDVILD
PETAHRKLIVSHDRKTVQYGNRMQNLPHNPRRFYLCPAVLGSEGYNSGRQYWEVDVKDKP
EWVLGVCKDSIPRRRRSQNPSVLLQDGLWCIRRGSQSNYVALGPKKINLLPKVIPSKIGI
FLDYELGEVSFYNLSDRSLLCIFNDYFTGALWPYFDTGTDSKPLKICTVTDSE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtgtcagccttggccgactttcaagcagaggctagctgtcccatctgtttg
gacttcttaaaagacccagtgaccattaactgtggacataacttctgtctctcctgcatc
aatatgtcctggaaggatctaactgatactttcccctgccctttttgccgattttgctgt
ctagaaaggaaatttgcaagcaatctccagctgggcaatttggctgaaattgctaaacta
ctccagataagaagaagcaagaggaagagacaagaagaaaaatttgtatgtgaaaagcac
aatcaggttttgacttttttctgtcagaaggacttagaggttttatgtccacggtgcagt
ttttctactgatcaccggaatcattatatttggcccatagagaaggctgcccgctatcat
agggaaagactggagtattgcattgagccgtggaaggagagagtggaacaagttgaaaaa
gtgataactatgcaaaccagaaagtcagtggaactgaagaagaaggtagaatataggaga
gaagaaataaggtctgaatttgagcaacttatgttgtttctccaaaatgagcaagagacg
gttcttcgggaattacaagacgaagaaacagctattttaacaaaactaaatgacaaccta
acaaaattttcagatcatgtttccacattaaaatgtctgttaaaggaaatagagagcaaa
tatgtgaagtcagaactggaattcctgacagatgttaaaagtatctaccatagatacaaa
accttaaaggcccctgaaccgttttcgttccaattaaaggaatatggttaccatcttcct
cctcaatattctggcctaaacaaaattatcaagcaatttcaagttgatgtgattctagat
cctgaaacagcacatcgtaaacttattgtttcacatgatagaaaaactgtgcaatatgga
aatagaatgcaaaacttacctcataacccaaggagattttatctttgcccagctgttcta
ggttctgagggatataattctggcaggcagtattgggaggtagatgtgaaagacaagcct
gaatgggttttgggtgtctgtaaagactctattcccaggagaagaaggagtcagaatcca
tcagttttattacaggatgggttatggtgtatcagacgaggtagtcagagtaattatgtt
gcattgggtcctaaaaaaattaatctcctgccaaaagtaatacctagtaagattggcatt
tttttagactacgaattaggtgaggtttccttttacaatttgagtgatagatctcttctc
tgtatttttaacgactattttacaggagcactttggccctattttgatactggaactgac
tcaaaacctcttaagatctgtacagtaactgattctgaatga
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