Rhodoferax ferrireducens: Rfer_0094
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Entry
Rfer_0094 CDS
T00334
Name
(GenBank) guanine-specific ribonuclease N1 and T1
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfr03019
]
Rfer_0094
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_0094
Enzymes [BR:
rfr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
Rfer_0094
Messenger RNA biogenesis [BR:
rfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Rfer_0094
Transfer RNA biogenesis [BR:
rfr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Rfer_0094
Prokaryotic type
Rfer_0094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
ABD67855
UniProt:
Q223E8
LinkDB
All DBs
Position
97461..97853
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AA seq
130 aa
AA seq
DB search
MLRLKSSKLVLTSFFLAAIFACAGVLAKGPAPADAATAIAVTALPKQGVQTYDLIHQGGP
FAHEKDGVVFGNRERLLPLQKRGYYREYTVATPNLHARGARRIVCGGAARAPDACYYTAD
HYASFRRIVP
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctgaaaagctctaagttagtacttaccagcttttttcttgctgcgattttc
gcctgtgcaggggtgctggccaaagggcctgccccggcagacgctgccactgccatcgcg
gtgaccgctttacccaagcaaggcgtgcagacctacgacctgattcatcaaggcggtccg
tttgcgcatgaaaaagatggtgtggtgtttggcaaccgtgagcgtttgctgccactccaa
aagcgtggttactaccgtgaatataccgtcgcaacaccgaatttacatgcccggggagcc
cggcgcattgtgtgcggaggggctgccagagcgcctgacgcttgttattacaccgccgat
cactatgcgagcttccgccggatcgtgccgtga
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