Rhodoferax ferrireducens: Rfer_0348
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Entry
Rfer_0348 CDS
T00334
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfr03000
]
Rfer_0348
Transcription factors [BR:
rfr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Rfer_0348
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_IclR
HTH_36
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABD68102
UniProt:
Q222F1
LinkDB
All DBs
Position
complement(347496..348983)
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AA seq
495 aa
AA seq
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MLSEYLLTEIARLGLQTKLPLHRQLYEALRRAMLDGKLCAGQRLPSSRELTQDLGLSRNT
VVAALNQLAVEGYLVSHIGSGTFVNDSVPKVAPRHRTAHEKQGATLSRRGRALATTFCAT
QLEIQPFTPGIADFSAFPVALWQRLQNKHWRMTYPDMLDYNFSGGYWPLRRAVADYLRVF
RSVPLDVDQVIITSGTQQSMELCAQLLADHSDTVWLEDPAYWGAIKAFMATGLNLHSVPV
DQEGIAPQAEDEAVPPRLIYVTPSHQYPTGAVMSLARRHQILSIARRHKAWVLEDDYDSE
FRFSGPPISSLAGLDTDQRVLYLGSFSKVLYPGLKLGYLVVPKTLVPPFKQAHYDLNRPG
QMPLQAALAEFIEMGYFASALRRARQGYAERRQCLLAALQPCLGPYAHISGAEQGLHLCV
RLPPTLDDKALAQRLGELGLTVRALSAYCLRRTDAKGLVIGYGYATLTDIAHYGPLVAKA
IAGALACLTPKLESL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgaatatttattgacagaaattgcacgcctgggcttgcagaccaagctgccg
ctgcaccgacagttatatgaagcgctgcgccgcgccatgctggatggcaaattgtgcgca
ggtcagcgcctgccgtccagtcgcgaattgacgcaggatttgggcctgtcgcgcaatacc
gtggtggcggcactcaaccagttggccgtcgagggctatctggtcagccatatcggcagc
ggcacttttgtcaatgacagcgtccccaaggttgcgccccgccaccggacagcccacgag
aagcagggtgcaacattgtcccgacgtggacgggcgctggcgacgacgttttgtgccacg
caacttgagattcagccgtttacccccggtatcgccgacttcagcgcttttcccgtggct
ttatggcagcgcctgcaaaacaagcactggcgcatgacctatcccgacatgctggactac
aacttttccggcggctactggccgctgcgccgggccgttgccgactatctgcgcgtcttt
cgcagcgtgccgcttgatgtcgatcaagtcatcattaccagcggcacccaacagtcgatg
gaactgtgcgcacagctactcgccgaccactctgataccgtctggctggaggacccggcc
tattggggtgccatcaaagcctttatggcgaccggtttgaacctgcattcagtgccggtc
gatcaggaaggtattgcaccccaagccgaggacgaagccgtgccgccacgcctgatctat
gtgacgccatcccaccagtacccgaccggtgccgtgatgtcgctggcgcggcggcaccag
attttgtcgattgcccgccgccacaaagcctgggttctggaagacgactatgacagtgaa
ttccgttttagcggaccaccgatttcgtcactggccggcctcgacactgaccagcgcgtg
ctttacctgggttcattctcgaaagtgctttatcctggcctcaaactgggctacctggtc
gtacccaagacgctcgtgccgcctttcaagcaggcgcactacgacctgaaccggccgggc
cagatgccgctgcaagcggcactggccgaattcattgaaatggggtacttcgccagcgcg
ctgcgccgtgcccgccagggctacgccgaacgcaggcagtgcctgctcgccgcgctgcag
ccctgccttgggccatacgctcacatctccggcgctgagcagggcctgcacctgtgtgtg
cggctgccccctacactcgacgacaaggccctggcgcagcgccttggggaacttggtttg
accgtgcgcgccttgtctgcgtattgtctgcgacgtaccgacgccaaaggtctggtcatt
ggttacggctatgcgaccttgactgacattgcgcattacggccccctggtcgccaaggcg
attgctggcgcactggcatgtttgacacccaagcttgagtctctatag
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