Rhodoferax ferrireducens: Rfer_0388
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Entry
Rfer_0388 CDS
T00334
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00010
Glycolysis / Gluconeogenesis
rfr00620
Pyruvate metabolism
rfr00630
Glyoxylate and dicarboxylate metabolism
rfr00640
Propanoate metabolism
rfr00680
Methane metabolism
rfr00720
Other carbon fixation pathways
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rfer_0388
00620 Pyruvate metabolism
Rfer_0388
00630 Glyoxylate and dicarboxylate metabolism
Rfer_0388
00640 Propanoate metabolism
Rfer_0388
09102 Energy metabolism
00720 Other carbon fixation pathways
Rfer_0388
00680 Methane metabolism
Rfer_0388
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfr01004
]
Rfer_0388
Enzymes [BR:
rfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
Rfer_0388
Lipid biosynthesis proteins [BR:
rfr01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
Rfer_0388
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABD68142
UniProt:
Q222B1
LinkDB
All DBs
Position
complement(395956..397764)
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AA seq
602 aa
AA seq
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MLSQGRRMERPVVIHKVASDLRLSPNWVDYEAGRRVDVWADARHALQGLPGGGLNLGFEA
VDRQAAGALRDHVALRFVARNAPPLDLRYFELAQQTNRFANVLRSLGVGKGDHLFVLAGR
IPELYVAVLGALKNGSVVTPLFSAFGPEPIAARIQLGAGRVLVTTDALYQRKVKQIRAQT
PTLVHVLLVAEDGGITNEPDTLDLGTLMASASDTFSTVETQPDDPALLHFTSGTTGTPKG
ALHVHEAVVTHFATGRYALDLHPQDRYWCTADPGWVTGTSYGIIAPLLQGVTSLIDREEF
DAERWYTLLEQERISVWYTAPTAIRMLMKAGTELAQRHSHPDLRFIASVGEPLNPEAVWW
GQEALGLPIHDNWWQTETGGIMIANTPAFDIKPGSMGRPLPGIDACIVEHLEAEGEPARV
RVIEEANVEGELALKRGWPSMFRAYLNNEARYRKCFAGELYLTGDLAKRDADGYYWFVGR
ADDVIKSAGHLIGPFEVESVLMEHPAVAEAGVIGKPDPVVGEVVKAFVSLKDGYQAGETL
RLDISAHARRRLGAAVAPKEIVFLPTLPRTRSGKIMRRLLKARELGLPEGDTSTLEGGAW
TK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtcaaggcaggcgcatggaaagacccgtcgtcattcacaaggttgcatcggac
ttgcgcctgtcacccaattgggtggattacgaggctggacggcgcgttgacgtgtgggct
gatgcccggcacgccttgcagggcctgcccggcggtggcctgaaccttggcttcgaggcc
gtggaccgccaggccgcgggcgccctgcgcgatcacgtcgcactgcgttttgtcgcgcgc
aacgcacctccactggacttgcgctactttgagttggcccagcaaacgaatcgctttgcc
aacgtcttgcgcagtctgggcgtgggcaagggcgatcacctgtttgtgctggccggacgt
attcccgaactgtacgttgcggtgctgggcgcgctgaagaatggcagcgtggtgaccccg
ctgttttccgcctttggcccggagccaatcgccgcccgcatccagcttggcgcgggccgg
gtgctggtgaccaccgacgcactctaccaacgcaaggtgaagcaaattcgggcgcaaacg
cccacccttgtgcacgtgctgctggtggccgaggacggtggcatcaccaatgagccggac
acactggatcttggcacgctgatggcgtcggcttctgacaccttcagcaccgtcgagacg
cagccggacgaccctgccctgttgcatttcaccagtggcaccaccggcacacccaaaggc
gcgctgcatgtgcacgaggccgtggtgacccactttgccaccggtcgctacgcgcttgat
ttacacccgcaggatcgctactggtgcacggctgatcccggctgggtcaccggcacctcc
tacggcatcatcgcgcccctgctgcagggcgtcacctcgctgattgatcgcgaggaattt
gatgccgagcgctggtacacgctgctggaacaggagcgcatcagcgtctggtacaccgcg
ccgaccgcgattcgcatgttgatgaaagccggcaccgagctggcgcagcgccacagccat
ccagacctgcgctttatcgccagcgtcggtgaaccgctgaacccggaggcggtctggtgg
ggccaggaggcgctgggcttgccgattcacgacaactggtggcagaccgagaccggcggc
atcatgatcgccaacaccccggccttcgacatcaaacccggctccatgggccgccccttg
cccggcattgacgcctgcatcgtcgagcacctggaagccgagggtgagccggcgcgggtg
cgcgtcattgaggaggccaatgtcgaaggcgaactcgcgctgaaacgcggctggccgtcc
atgtttcgtgcctacctcaacaacgaggcccgttaccgcaagtgtttcgccggtgagctg
tacctgaccggcgatctggccaagcgcgatgccgatggctattactggttcgtcggccgt
gccgatgacgtcatcaagtcagccgggcacctgatcgggccgttcgaggtcgagagcgtg
ctgatggagcacccggcggtggccgaggccggcgtcatcggcaagcccgatccggtggtc
ggtgaggtggtcaaggcgtttgtctcgctcaaggacggctaccaggccggcgagaccttg
cgcctggacatctcggcccacgcgcgccgacggctcggtgccgccgtggcacccaaggag
atcgtctttttgcccacgctgccgcgcacgcgcagcggcaagatcatgcgccgcctgctc
aaggcgcgtgaactcgggctgcccgagggcgacacctcgaccctggagggtggcgcatgg
acaaaatga
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