Rhodoferax ferrireducens: Rfer_0500
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Entry
Rfer_0500 CDS
T00334
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_0500
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rfer_0500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_22
ChlI
DnaB_C
Lon_C
RecA_N
AAA_16
GvpD_P-loop
NTPase_1
SLFN-g3_helicase
AAA_5
NPHP3_N
AAA_14
AAA_24
nSTAND3
nSTAND_NTPase5
AAA_29
NACHT
ZnF_RZ-type
ABC_tran
zinc_ribbon_6
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ABD68252
UniProt:
Q221Q1
LinkDB
All DBs
Position
518783..520147
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AA seq
454 aa
AA seq
DB search
MAKEKTVYVCSDCGGTSPKWQGKCPSCNAWNTLIESVPESLSPTKNRFASLAKTAEIAIL
GDIDAVDMARTPTGHEELDRVLGGGMVEGGVVLIGGDPGIGKSTLLLQALDSLQCSGQNT
LYVTGEESGAQVALRSRRLGLGHSQVRVLAEIQLEKILSVLAATQPDIAVIDSIQTVYSD
QLTSAPGSVAQVRECAAHLTRAAKASGVCIVLVGHVTKEGALAGPRVLEHMVDTVLYFEG
DTHSSFRLVRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHAEPVPGSCVMVTLE
GTRPMLVEIQALVDSGGPSPRRLSVGLDKDRLAMLLAVLHRHAGVACMDQDVFVNAVGGV
RISEPAADLAVLLAITSSLRGKPLPKGFFAFGEVGLAGEVRPAPRGQERLKEAAKLGFSV
ALVPKANAPKKPIEGLTIHAVERVEQAMEVVRGL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaaaaaccgtttacgtttgctccgattgtggcggcaccagccccaaatgg
cagggcaaatgccccagttgcaacgcctggaatacgctgattgaatcggtgccagagagc
ttgtcccccaccaaaaaccgtttcgcctccctggccaagacggcagaaatcgccattctg
ggcgacattgacgcggtggacatggcgcgcacccccaccggccacgaggagcttgaccgt
gtgctgggcggcggcatggtcgaaggcggcgtggtactgatcggcggcgaccccggcatt
ggcaagtccaccctgctgctgcaggcgctcgactcgctgcaatgcagcggccagaacacc
ttgtacgtgacgggcgaagaaagcggcgcgcaagtcgcgctgcgctcgcgccgcctcggg
ctgggccactcgcaggtgcgggtgctggccgagatccagctggaaaaaatcctgtccgtt
ttggcggccacccagcctgacatcgccgtcatcgactcgatccagacggtctactcggat
cagctcacgtcggcccccggttcggtggcgcaagtgcgcgaatgcgcagcgcacctgacg
cgtgcggccaaggccagcggtgtctgcatcgtgctggtcggtcatgtcaccaaggaaggc
gccctggcgggcccgcgtgtgctggagcacatggtggacacggtgctctactttgaaggc
gacacgcattcaagtttcaggctggtgcgcgccatcaagaaccgctttggcgcggtgaac
gaaattggcgtctttgccatgaccgaaaagggtctcaaaggggtgagcaacccgagcgcc
attttcctgagccagcacgccgagccggtgcccggcagttgcgtgatggtgacgctggag
ggcacacggccgatgctggtggaaattcaagcgctggtcgacagcggtgggccctcgccc
cggcgtttgagcgtgggcctggacaaagaccgcctcgccatgctgctggccgtgctgcac
cgccacgcgggcgtggcttgcatggaccaggacgtgtttgtgaacgcggtcggcggtgtg
cgcatcagcgagcccgctgccgatctggcggtgctgctggcgatcacgtcgagcctgcgc
ggcaagccgctgccgaagggattctttgcctttggcgaggttggcctggccggtgaagtg
cggcccgcgccgcgcggtcaggaacggctgaaggaagccgccaagctgggctttagcgtg
gcgctggtgcccaaggccaacgcgccgaaaaaaccgattgaaggcttgaccatccatgcg
gtggagcgcgtcgagcaggcgatggaggtggtgcgggggctgtaa
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