Rhodoferax ferrireducens: Rfer_0545
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Entry
Rfer_0545 CDS
T00334
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00061
Fatty acid biosynthesis
rfr00071
Fatty acid degradation
rfr01100
Metabolic pathways
rfr01212
Fatty acid metabolism
rfr02024
Quorum sensing
rfr04146
Peroxisome
Module
rfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rfer_0545
00071 Fatty acid degradation
Rfer_0545
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rfer_0545
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rfer_0545
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfr01004
]
Rfer_0545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfr04147
]
Rfer_0545
Enzymes [BR:
rfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rfer_0545
Lipid biosynthesis proteins [BR:
rfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rfer_0545
Exosome [BR:
rfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rfer_0545
Exosomal proteins of breast cancer cells
Rfer_0545
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABD68296
UniProt:
Q221K7
LinkDB
All DBs
Position
complement(569083..570768)
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AA seq
561 aa
AA seq
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MEKIWLKSYPPGVPHDVNPEQYQSLTQLLEESFRKNASSRFAVCMESWMTYGQLDQLSSA
LGAWLHSLGLAPDARVAIMLPNIPQFPVTMAGVLRGGYTCVNVNPLYTARELQHQLNDSG
ASVIVVLENFVATLAEVIDQTPIQHVVVASMGDLLGFWYGQWITFAVRHLAKMVPPYKLT
LTEGRTATSFKQAIAKGAALPFRSAPSTLDSIAFLQYTGGTTGLSKGAVLTHRNIVAAVL
QAEAWFNPALSRIGDVRHVNSIAALPLYHIFALTLSLLAIRWGAQLTLIPNPRDFGGFIE
TLKKRPFHLLPGVNTLFNALLAQPQFKTVDFSSLCATQAGGMAASEGTAQRWLETTGCPM
VEGWGMSETCAIGTNNPVLAREFSGTIGLPLPGIDIAIKDDEGQSLAQGSPGEICIRGPN
VMTGYYRQPEENRRAFTTDGFLRTGDVGIMDERGYTKIVDRKKDMILVSGFNVFPSELEN
VISLCDGVLECAVIGVPDEKQGEAIKVFVVRDNPLLAEDDVARYCQQNLTGYKHPKYIEF
RDELPKSNVGKILRRELRVGK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggctcaagagctacccccccggtgtcccgcatgacgtcaacccggaa
caataccaatcattgacacagctgctggaagaatccttccgcaagaacgccagcagccgc
ttcgccgtgtgcatggagagctggatgacctatggccagcttgatcagctctcaagcgcg
ctgggcgcctggctgcacagcctgggcctggcgccggacgcgcgggttgccatcatgctg
cccaatatcccgcagtttccggtgacgatggccggcgtcttgcgcggcggctacacctgt
gtcaacgtgaacccgctgtacaccgcgcgcgagttgcagcaccagttgaacgactccggc
gcgagcgtgattgtggtgctggagaactttgtcgccaccctggccgaagtgattgaccag
accccgatccagcatgtggtggtggcttccatgggcgacttgctgggcttttggtacggc
cagtggatcacgtttgccgtgcgccacctcgccaaaatggtacccccttacaaactgacg
ctgaccgagggccgcaccgccacctcgttcaagcaggccatcgccaagggcgccgccctg
cccttcaggtcggcgccgagcacgctcgattccatcgcattcttgcagtacaccggcggc
accacgggcctgagcaaaggcgccgtgctgacgcaccgcaacatcgtggcggcggtcttg
caggccgaggcctggttcaacccggcgctctcgcgtatcggcgacgtccgccacgtcaac
agcattgccgcgctgccgctgtaccacatctttgcgctgacgctgtcgctgctggccatc
cgctggggggcgcagctgaccctgattccgaacccgcgcgattttggcggcttcatcgag
acgctcaaaaagcgcccgttccatttgttgccgggtgtcaacaccttgttcaacgccctg
ctggcgcagccgcaattcaagacggtggatttttccagtctctgcgcgacgcaagcgggc
ggcatggcggcttcagagggcaccgcccagcgctggctggagaccaccggttgcccgatg
gtcgaaggctggggcatgagcgagacctgcgccattggcaccaacaacccggtgctggct
cgggagttttcgggcaccatcggcctgccgctgcccggcattgacatcgccatcaaggat
gacgagggccagtctctggctcaagggtcgcccggtgaaatctgcatccggggcccgaat
gtcatgaccggctactaccgccagcccgaagagaaccggcgcgccttcaccaccgacggc
ttcctgcgcaccggtgatgtcggcatcatggacgagcgcggttacaccaaaattgtggac
cgcaagaaagacatgatcctggtcagcggcttcaacgtcttcccgagtgaactcgaaaat
gtgatttcactgtgcgatggcgtgctggagtgcgccgtcatcggggtgcccgacgagaag
caaggcgaagccatcaaggtctttgtcgtcagggacaacccgctgctggccgaggacgac
gtggcgcgctattgccagcagaatctgaccggctataaacaccctaagtacattgaattc
cgtgacgaactgcccaaatcgaatgtcggcaagatacttcggcgtgagttgcgcgtcggc
aaatag
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