Rhodoferax ferrireducens: Rfer_0594
Help
Entry
Rfer_0594 CDS
T00334
Name
(GenBank) extracellular solute-binding protein, family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rfer_0594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_0594
Transporters [BR:
rfr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Rfer_0594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ABD68345
UniProt:
Q221F8
LinkDB
All DBs
Position
619697..620728
Genome browser
AA seq
343 aa
AA seq
DB search
MKLKPIVAACALLACAASFAQTQITVVNFGGANGNAQKKAYFEPYEKATGNKIVGVEYNG
EQAKIKAMVEAKQVNWDVVEVESPDVTRGCDEGLFEKLDYSKIGNKADFTPAAIHECGIG
TFVWSTVMAYNADKLKTAPTTWADFWDVKKFPGKRAMRKGARYNLEFALMADGVAVQDVY
KVLATKDGAERAFKKLTELKPNIQWWEAGAQPPQFLVAGDVVMTTAYNGRIDAAQREGKN
LQITWTGGIYDLDYWVMPKGASNREATLKFIAMASSSKEQAEYAKLISYGPTNVKALTML
DAKVLGKLPTAPANAKTALQFNVGFWADQGEALEKRFAAWAAQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaacccatcgtggccgcttgtgcgctgctggcctgtgcggccagcttcgcg
cagacccagattaccgtcgtcaatttcggcggagccaatggcaatgcccagaagaaggct
tactttgagccttatgagaaagccaccggcaacaagattgttggcgtggagtacaacggt
gagcaggccaaaatcaaggccatggtcgaggccaagcaagtgaattgggatgtggtggag
gtcgagtctcccgacgtgacacgtggttgcgacgaaggcctgtttgaaaagctcgactac
agcaagattggcaacaaggctgacttcaccccggccgcgattcatgagtgcggcattggc
acttttgtctggtccaccgttatggcctataacgccgacaagctcaagaccgcacccacc
acctgggctgacttctgggacgtcaagaaattcccgggcaagcgcgccatgcgcaagggc
gcccgctacaaccttgagtttgccctgatggctgacggtgtggcggtgcaagacgtgtac
aaggtgctggcgaccaaggacggcgccgagcgcgccttcaagaaactgaccgaactcaag
cccaacattcagtggtgggaagccggtgcccagccgccgcaatttctggtggcgggtgat
gtcgtcatgaccaccgcttacaacggccgcattgacgccgcccagcgcgaaggcaagaac
ctgcagatcacctggaccggtggcatctatgacctggactattgggtgatgcccaaaggg
gcgtccaaccgagaggcgaccctgaaattcatcgccatggccagcagttcgaaagagcag
gcggaatacgccaagctgatctcctacgggccgaccaacgtcaaggcgctgaccatgctc
gacgccaaggtactgggcaagttgcccacggcaccggccaatgccaagacagcgttgcaa
ttcaacgtcggtttctgggctgaccagggtgaggcgcttgagaagcgctttgccgcctgg
gccgcgcagtaa
DBGET
integrated database retrieval system
