KEGG   Rhodoferax ferrireducens: Rfer_0700
Entry
Rfer_0700         CDS       T00334                                 
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr00300  Lysine biosynthesis
rfr00470  D-Amino acid metabolism
rfr01100  Metabolic pathways
rfr01110  Biosynthesis of secondary metabolites
rfr01120  Microbial metabolism in diverse environments
rfr01230  Biosynthesis of amino acids
Module
rfr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
rfr_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Rfer_0700
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rfer_0700
Enzymes [BR:rfr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Rfer_0700
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ABD68451
UniProt: Q220V2
LinkDB
Position
736703..737947
AA seq 414 aa
MTLTERQLPVHAPMNQFSVREGELTVGGERLSLLAARVGQTPFYAYDRLLLRARVAALRG
VLPRTVKLHYAMKANPMPAVVGLMVGLVDGIDVASAGELKVALDAGANPLEISFAGPGKR
DAELRQAVASRVLINLESFREVAALEAICGELGLSARVAVRVNPDFELKGSGMKMGGGPK
QFGVDVEQIPELLGCIGRAGLSFEGFHLFAGSQNLRSESICEAQQKSYELALRLAQHAPA
PVRFLNLGGGFGIPYFPGEQRLDLAPIGDNLAQLVQRAQTELPDAALVIELGRYLVGEAG
VYVARIVDRKVSRGQVYLVADGGLHHHLSASGNFGQVIRKNYPVTIGNKADSRETETVSV
VGPLCTPLDLLAERMALPVAQVDDLVVVFQSGAYGASASPQGFLGHPACLEVLV
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgactctcactgaacgccaactgcccgtgcatgcccccatgaaccagttctccgtgcgc
gagggcgaattgaccgtgggtggcgagcgtttgtcattgcttgccgcgcgggtggggcaa
acgcctttttatgcctatgaccgtttgttgttgcgcgcccgggtggcagcgctgcgcggc
gtgctgcccaggacagtcaagctgcactacgcgatgaaggccaaccccatgcctgcggtg
gtgggtttgatggtcggtttggtggacggtattgacgtggcttctgcgggcgagcttaaa
gtggcattggatgccggcgccaacccgctggaaatcagctttgccggaccgggcaagcgc
gatgccgagttgcgccaggcggtggcgtcgcgcgtgctgatcaaccttgaatcgtttcgc
gaagtggcggcgctggaggccatttgcggcgaattgggcttgagcgcgcgcgtggcggtg
cgggtcaaccccgactttgaactcaagggttcaggcatgaaaatgggcggtggccccaag
cagtttggtgtggatgtggagcagattcccgagctgctgggctgcatcggccgtgccggt
ctgtcctttgaaggttttcatttgtttgccggttcgcagaatttgcgttcggagtcgatt
tgcgaagcgcagcaaaagtcttacgagctggcgctgcggctggcacagcatgcgccggcg
ccggtgcgctttctgaatctgggtggcggctttggtattccctactttccgggtgagcaa
cggcttgatctggcccctattggcgacaacctggcccaactggtccagcgggcgcagacc
gagttgcccgacgctgccctggtgattgaactgggtcgctacctggtgggcgaagccggg
gtttacgtggcccgcattgtggatcgcaaggtgtcgcgcgggcaggtgtatctggtggcg
gacggcgggctgcatcatcatttgtccgcgtccggcaactttggccaggtgatacgcaaa
aactacccggtgacgattggcaacaaggccgactcgcgggagacagaaacagtgtcggtg
gtcggacctttgtgcacgccgctggacctgctggccgagcgcatggctttgccggtggca
caggtcgatgatctggtggtggtattccagtcgggcgcttatggcgccagcgccagcccg
caaggctttttggggcatcccgcttgtcttgaagttcttgtttag

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