KEGG   Rhodoferax ferrireducens: Rfer_0829
Entry
Rfer_0829         CDS       T00334                                 
Name
(GenBank) PHP-like
  KO
K02347  DNA polymerase (family X)
Organism
rfr  Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfr03400]
    Rfer_0829
DNA repair and recombination proteins [BR:rfr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    Rfer_0829
SSDB
Motif
Pfam: HHH_8 DNA_pol_B_thumb HHH_5 HHH PHP DNA_pol_B_palm HHH_3 Cdd1
Other DBs
NCBI-ProteinID: ABD68579
UniProt: Q220H4
LinkDB
Position
complement(865566..867308)
AA seq 580 aa
MPITNADVVAVFSEIADLLEIEGANPFRVRAYRNAARMLGELGRSVRTMVDRPEELDALP
GIGPDLAGKIVEVVTTGSCALLQRLRKELPPVITELLKIPGLGPKRVRTLHRELGIETLA
QLRQAAEQGRVQSVHGFGAKSERQILEATGRLLQQERRYKWADMEPVAQALLADLHATPG
VHRAVAAGSLRRGRETVGDLDLLVTAENPGTVMDRLTASEDIQRVLEQGVTRSSVVLKSG
LQVDLRAVAPASFGAAWLYFTGSKAHNIALRKLAQDKDLKLNEYGLYRGKQRIAGDTETA
VYKALGLPFIEPELREDRGEIEAARSGALPRLLQLTDLRGDLHAHTKDSDGHDPIEAMAE
AARAHRLHYLAITDHSKRLALVHGLDADGLSRQIDRIDEINASLRDFVLLKGVEVDILED
GSLDLPDAILGRLDLVVGAVHSGFDLSRDKQTDRLLRAMDHRCFSILAHPTGRLINERPP
CDIDLPRVVRKARERGCFLELNAHPARLDLSDAACRIAKSEGVLVSINSDAHSRLQFDSL
RFGVSQARRGWLETGDVLNTRTLGQLRSLLAATMARGVGQ
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgcccattaccaatgccgacgtagttgctgttttctcggaaatcgccgatctcctggaa
atcgagggcgccaatccatttcgcgtccgcgcctaccgcaatgccgcgcgcatgctgggc
gagttgggccgcagtgtcagaaccatggtcgaccgcccggaagaacttgacgccctgccc
ggcattgggcctgaccttgcaggcaagattgtcgaagttgtcaccaccggcagctgcgcg
ctgctgcagcgactgcgcaaagaactgccgccggtcattaccgagttgctgaaaattcca
gggctgggcccgaagcgcgtgcgcacgctgcaccgggagctcggtattgagacactggca
cagttacgccaggcggccgagcaagggcgcgtccagtcggtccatggttttggcgccaag
agtgagcggcaaattctggaggccaccggccgcctgctgcagcaagagcgccgctacaag
tgggccgatatggagccggtggcgcaggcgctgctggccgatctgcacgccacgccaggc
gtgcacagggcggttgcggccggcagcctgcgccgggggcgcgagacggtaggtgacctc
gacttgctcgtgacggccgagaaccctggcactgtcatggatcggctgacagcgagtgaa
gatatacaacgcgtattggagcaaggcgtgacgcgcagcagcgtcgtgctcaagagtggc
ctgcaggtcgatttgcgcgccgtggccccggcgagtttcggtgcggcgtggctttacttc
acggggtcgaaggcacacaacatcgcgcttcgcaaactggcacaggacaaagacctcaaa
ctcaacgaatacggcctgtatcgcggcaagcagcgcattgcaggcgacaccgaaactgcg
gtgtacaaagcgttgggtctcccttttatcgaaccggaactgcgcgaggaccgtggcgag
atcgaagcggcacgtagcggcgccctgccccgcttgctgcaactgaccgatctgcgtggc
gacttgcatgcccacaccaaagacagcgacggtcacgaccctattgaagccatggccgag
gccgcccgcgcgcaccgtctgcattacctggcgatcacggaccattcgaagcgtctggcc
ttggtgcacggcctggacgcggacgggctctcgcggcagatcgaccgcatcgatgaaatc
aatgccagtctgcgtgacttcgtcctgctcaagggcgtggaagtcgacatcctggaagat
ggctcgctcgacctgcctgatgcgattctgggtcgccttgacctcgtggtgggcgctgtg
cacagtggcttcgatttgtcccgcgacaagcagactgaccggctgctgcgggccatggac
caccgctgtttcagcattctggcgcatcccacggggcgactgatcaatgagcggccaccc
tgtgacatcgacctgccgcgcgtggtccgcaaggcgcgcgaacgtggctgctttctggaa
ctcaatgcgcatccggcccggctcgacctgagcgatgccgcctgccggatagccaagagt
gagggcgtgctcgtcagcatcaactcggatgcgcacagtcgcctgcaatttgacagtttg
cgcttcggggtcagccaggcaagacgcggctggctggaaaccggcgatgtgctcaacacc
cggacgctgggtcagttgcgctccttattggctgccaccatggctcgcggcgtgggccag
tga

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