Rhodoferax ferrireducens: Rfer_0917
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Entry
Rfer_0917 CDS
T00334
Name
(GenBank) Penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00550
Peptidoglycan biosynthesis
rfr01100
Metabolic pathways
rfr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rfer_0917
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rfer_0917
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rfr01003
]
Rfer_0917
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfr01011
]
Rfer_0917
Enzymes [BR:
rfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Rfer_0917
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rfer_0917
Glycosyltransferases [BR:
rfr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Rfer_0917
Peptidoglycan biosynthesis and degradation proteins [BR:
rfr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Rfer_0917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ABD68665
UniProt:
Q21ZY8
LinkDB
All DBs
Position
complement(961083..963341)
Genome browser
AA seq
752 aa
AA seq
DB search
MKHLISPFLCRLVLLWAVALPFASAATPLDLPNLDALMDYRPKIPLRVYTSDNVLIGEFG
QERRDVVAIKDIPLVQKQALLAIEDSRFYEHGGVDFKGMARAVIADLSGGLKQGASTITM
QVARDFFLTKEKLFSRKVTEVMLAYKIERALTKDQILELYMNQIYMGQRTYGFGSAARVY
FGKALKDLSIAQAAMLAGLPQAPSSINPVANPKGAKARQHLVLRRMRDLGYINEAQYKSA
LQENIHTLGEGQSINGHAQFVAEMVRQTMYAQFKEETYTRGISVITTLVQSDQEAAYDAV
RRNVMAFDQRHSYRGPEALVALPRNTIERQKSIEATLQQHPASDKLLSAVTIAVTPKSLR
AILTTGDEIQIGAEGLRRAAAALAPTAPSTLKIKPGSVIRVVQDSRGRWSITQLPVVGAA
FVALNNQTGAYRALVGGFDFNASQLNHVTQAWRQPGSAIKPFIYSAALEKGFSPGTLVND
VPLTLSGLETGGQPWQPQNDDDVYDGPITLRVALAQSKNVAAVRLLRAITPKYAHDFLPR
FGFDATKQPVNYTLALGTGSVTPLQMAQAYSVFANGGFQVNPHLIKKVVDTRGTVLFEAK
PTVPAQETARVLDARKAFIIDSMLHEVTSSGTGAAASQKLGRQDLAGKTGTSSQSFDGWF
AGYSGDTTAVAWMGYDEPRSLGGREFGATLALPIWIDFMRVTLAGMPLNQALKPAGVTQS
QGDWMLDEFLNTGAIRTLDLDAPQALEELASP
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatctaatctctccatttctctgccggctggtgctgctgtgggcggttgccttg
cccttcgcatctgccgccacgccgttggatttaccgaatctggacgccttaatggactat
cggccaaaaattccgctgcgcgtgtacaccagcgacaacgtgctcattggtgaattcggt
caggagaggcgcgacgttgtcgcgatcaaggacattccacttgtccagaaacaggccctg
ctggcgatcgaggattcgcgcttttacgagcatggtggcgttgactttaagggcatggcg
cgagccgtgattgccgacttgagcggcgggctcaaacaaggtgcttcaacgatcaccatg
caagtggcacgtgacttcttcctcaccaaggagaaactgttttcgcgcaaggtgacggag
gtgatgctggcctacaaaatcgagcgggcgttaaccaaagaccagatattggaactctac
atgaaccaaatctacatgggtcagcggacatatggattcggcagtgcggctcgggtctat
tttggcaaagcactcaaggatctgagcatcgcgcaggcggccatgctggccggcctgcct
caagcgccgtcaagcatcaacccggtggctaaccccaaaggtgccaaagcgcgccaacac
ctggtgctgaggcgcatgcgcgatctgggttatatcaacgaagcgcaatacaagtccgcg
cttcaggagaacattcatacgctcggcgaaggccagtcgatcaacggccatgcgcaattt
gttgcagaaatggtgcgccagacgatgtacgcccagttcaaggaagaaacctacaccaga
ggaatcagcgtcatcactacgcttgtgcagtccgaccaggaggccgcatatgacgcagtg
cggcgcaatgtaatggctttcgaccaacgccatagttaccgtggtccggaggcccttgtg
gctttacctcgcaacaccattgagcgccaaaaatcgattgaagctaccctgcaacaacat
cccgccagtgacaagttattgtctgctgtgaccatcgctgtgacaccaaaaagcctgcgt
gcgatattgaccactggtgatgagatccagatcggcgcagaaggcctgcgcagggctgca
gcggccctggcgcccacggcaccatcgacactcaagatcaagccgggttccgtgatccgt
gtggtgcaagatagtcggggccgctggagcatcacgcaattgcccgtcgtaggtgcggcc
tttgtggcgctgaacaatcagactggagcatatcgcgcattggtgggcggctttgatttc
aatgccagccagctcaatcacgttacccaggcatggcgccaaccggggtcagccatcaag
cccttcatttattccgctgcgctggaaaaaggtttttcgccaggcaccctcgttaacgat
gtgccgctgacgctgagtggtctggagaccggcggtcagccctggcaaccacagaatgac
gatgacgtatacgacggcccaatcaccctgcgtgttgcacttgcacagtccaaaaacgtt
gctgcagtgcgcctgctgcgcgccattacgccgaagtacgcacatgactttttgccccgt
tttggctttgatgccaccaagcagccagtgaactacaccctggcgctgggcactggttca
gtcactcccctacaaatggcgcaggcctactcggtgtttgccaacgggggttttcaggtc
aaccctcacttgattaaaaaggtagtggacacgcgtggcaccgtgctctttgaggccaag
ccgactgttcccgcgcaggagaccgcgcgcgtgctcgatgcgcgcaaggcgttcatcatt
gacagcatgttgcatgaagtcactagctcgggcaccggtgctgccgcatctcaaaagctt
ggacggcaggacctggcgggcaagacgggcaccagcagtcagtctttcgacggctggttt
gcgggctacagcggtgacacgacagcggtggcatggatgggttacgacgaaccccggtct
ctgggtggacgcgagtttggtgccacattggcgctgcccatatggatcgatttcatgcgc
gttacattggccggcatgccgctcaaccaagccctgaagccggctggagttacgcaatct
cagggtgactggatgcttgacgaatttctaaacaccggtgccattcgcacgctggacctg
gacgctccgcaagcactggaggaattggctagcccttga
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