Rhodoferax ferrireducens: Rfer_0957
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Entry
Rfer_0957 CDS
T00334
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfr03000
]
Rfer_0957
Transcription factors [BR:
rfr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Rfer_0957
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_AraC
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ABD68702
UniProt:
Q21ZV1
LinkDB
All DBs
Position
1006210..1007244
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AA seq
344 aa
AA seq
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MVSKKRDNRASGRVTLDDVALAAGVSRMTVSRALRGDRKVAPELVARAIQAANRLGYVPD
PAARALASSKSSHVAILIPLLSNQLFVDLLEGVQRTLLPTGYQTLMGVTHYDASEEEQLL
KGYLMHRPAGLLVTGSEHSESTKQLIAKSGIPCVHLMETLAQDGIYSVGFSQRDAARVVT
QHLIDTGRRRIAFAAAQLDPRTLQRAHGYRDCLKEAGLYDATLEWQNPAPSSLKIGSTMF
EQILSIRPRVDAIFFCNDDLAQGGLLAALRMGIKVPRQVSIAGFNDLPGSAEFVPSLTTI
KTPRWEIGVRAAKMLLQLMRGEPVAEPNVDLGFELVLRQSTAVA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcaaaaaacgggataacagggcttcaggtcgggtcacgctcgatgacgtggcg
ttggccgcaggtgtgagtcgcatgacggtttcgcgtgcactgcgcggggaccgcaaggtt
gcgcctgaactggtggcacgtgccattcaggcagccaaccggctgggttatgtgcctgac
ccggctgcgcgcgctctggcatcgagcaagagttcgcacgtggcgatactgattccgcta
ctttcgaatcagctattcgtcgatctgctggaaggagttcaacgcacactcttgccaact
ggataccagacgctgatgggggtcactcactatgatgcgtccgaagaggagcaactgctc
aaagggtatctgatgcatcgccctgccgggttgctggttacagggtcggagcactcagag
tcgaccaagcagctcattgccaagagtggtattccttgtgtgcacctgatggagactctg
gcgcaggatggaatctacagcgtgggattttcccagcgcgacgcggcacgcgtcgttact
caacatttgatagacacgggacgccgccggattgcctttgcggcagcgcagctggatcca
cgcacacttcagagagcgcatggctaccgtgattgtctcaaggaggcgggcttatacgat
gccactctcgagtggcagaacccggcgccttcttcgctgaagatcggaagcaccatgttc
gaacagatactcagcattcgccctcgcgttgacgccatctttttctgtaacgatgacctg
gcccagggtggtttgctggccgcattgcgcatgggcatcaaggtgccgcgccaggtttct
atcgcgggcttcaacgatttgccgggcagcgctgaattcgttcccagccttaccactatc
aaaacaccacgttgggagatcggtgttcgagccgcgaagatgctgttgcagctgatgcgc
ggtgagcctgtcgccgagcccaacgtcgatttggggtttgagttggttctgcggcaaagc
accgccgtcgcttga
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