Rhodoferax ferrireducens: Rfer_1012
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Entry
Rfer_1012 CDS
T00334
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02010
ABC transporters
rfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rfer_1012
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rfer_1012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_1012
Transporters [BR:
rfr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Rfer_1012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF1152
Motif
Other DBs
NCBI-ProteinID:
ABD68755
UniProt:
Q21ZP8
LinkDB
All DBs
Position
1068094..1069410
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AA seq
438 aa
AA seq
DB search
MISSKLIGKTRGGLVSMLAAASLLTLAGAAQAQETFKLGVVTFLSGPAAESFGMPAANAA
KLMVEQFNKAAAPAPYNKVGFGGMKIEMVLVDENGGGAKQVQELRNLYQRENVDAVIGYV
GSGDCLAVAPVADELKKFLVLFDCGSPRIFEDASPKYVFRTASHAAMDNVSLVRYLKSHN
VKVNTMNLINQDYAWGQDSRGDFLASMANVYPQAKMGADLLPKFGAGQYGTEVSVLGGKQ
ADITYSSLWGGDLQGFLLQGAARGLFKDTTLVLSAADHVLPGLLDKMPDGSIIGARGAYG
ILSAKSPINDWFQASYQSMHKVLPVQAGYRMTQAFMGVKLAVETAMAKNGGKKPSPEQIS
DALRNSTFETPGGQIRMALGDGHQAIQGTAIGRTRYDAASKRVLAVDVQTFGAECVNPPA
NMKSMDWIKAGFPGAKCN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatccaaactgataggcaagactcgcgggggcctggtcagcatgctggcggct
gcgagcctgctgacattggccggcgcagcgcaggcccaggagacattcaagctcggcgtt
gtgaccttcctgtcgggcccggctgccgagagtttcggcatgcctgccgccaatgccgcc
aagctcatggtcgagcagttcaacaaggccgcagcaccagctccgtacaacaaggttggt
tttggcggcatgaagattgaaatggttctcgtcgacgagaacggtggtggcgcaaaacag
gtgcaggagctgcgcaatctgtaccagcgcgaaaacgttgacgcggtgattggctacgtt
ggctcgggcgattgcctggccgtggcgccggtcgctgacgaactcaagaaattcctcgtc
ttgttcgattgcgggtcaccgcggatttttgaggacgccagtccgaagtacgttttccgg
acggcctcgcacgccgccatggacaacgtgtcactggtgcgctatcttaaatcccacaac
gtcaaagtcaacaccatgaacctgatcaatcaggattacgcgtgggggcaggattcacgc
ggggatttcctggccagtatggcgaacgtctatccccaggcaaaaatgggtgcggatctg
ttgcccaagtttggcgccggccaatacgggaccgaggtctcggtactcgggggcaagcag
gctgacatcacctattccagcctgtggggcggtgacttgcaaggcttcctgttgcagggt
gcagcgcgcggcctgttcaaggatacaaccctggtcctgagcgcggcagatcacgttttg
ccgggcttgctcgacaagatgcctgacggttcgatcatcggcgcgcgcggcgcttacggc
attctgtcggccaagagccctatcaatgactggtttcaggccagctaccagtccatgcac
aaggtgcttccggtgcaggccggctatcgtatgacgcaagcgttcatgggcgtgaagctg
gcagtcgagactgcaatggccaagaacggcggcaagaagccctctccggaacagatttct
gatgccctgcgcaactcgacattcgagacccccggcggacagattcgcatggccctcggt
gatggccatcaggccattcagggcactgccattggcaggacgagatacgacgctgccagc
aagcgcgtgctggcggtcgacgtgcagacctttggcgctgaatgcgtcaatccacccgca
aacatgaagagcatggattggatcaaggccggctttcccggcgccaaatgcaactaa
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