Rhodoferax ferrireducens: Rfer_1260
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Entry
Rfer_1260 CDS
T00334
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00523
Polyketide sugar unit biosynthesis
rfr01110
Biosynthesis of secondary metabolites
rfr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Rfer_1260
Enzymes [BR:
rfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
Rfer_1260
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NmrA
NAD_binding_10
adh_short
KR
Sacchrp_dh_NADP
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ABD68994
UniProt:
Q21Z09
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Position
1354551..1355699
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AA seq
382 aa
AA seq
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MSNFVLVTGGAGFIGQCVSRKLLGQGSKVRILDNFSPQIHSTEVLPVDLAGHVEVIKADV
RDRDALRRALPGVDTVVHLAAETGTGQSMYEIERYFSVNAQGTATLLDLLQNDDCGKSLR
SIVVASSRAVYGEGACQCAAHGMVFPEQRTRERMSGGAFEPVCPVCGSPVRLSPTPESAP
FMPMSMYGLTKQVQEQAVLLFARTRGINGFGLRYQNVYGPGQSLKNPYTGILAVFSNLAR
QNQGIEIYEDGLESRDFVYIDDVVEATIRSINYSDQFVGALNVGSGQATSVMTVAQEIKA
YFDSSSTIKVTGAFRMGDIRHNIADVSKLEQVLGFVPGVPFKQGLANFLGWAAEQAPEDK
AAYLRSVSELTARGLMGKTTAQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttgtgcttgttacaggtggcgctgggtttattggtcaatgcgtttctcgt
aagctactaggtcaaggctcaaaagtgcgtattctcgataacttcagtccacagatacac
tccacggaagttctgccagttgatctggcaggacatgtagaggtaatcaaagcagacgtg
cgtgatcgagatgcgctcaggcgcgcattgccgggtgtagacactgtcgtgcatctcgcg
gcagaaacgggtacgggtcaatcgatgtatgagatagagcgctatttcagcgtcaacgcg
cagggcactgccactttgctggatttgctgcagaacgatgattgcggcaagtcgcttcgc
tctattgtggtggcgtcgagtcgcgcggtctatggcgagggcgcttgccagtgcgcggcc
cacggcatggtgttcccggagcaacgtacccgcgagcgcatgtctggcggcgcgttcgag
ccagtgtgccccgtctgcgggtcgcctgtaaggctatcgcccacgccagagtcagcgccc
tttatgcccatgtcaatgtatgggttgaccaagcaggtgcaagagcaggccgtcttgttg
tttgcgcgcacgcgtggcatcaatggatttggtctgcgctatcaaaatgtgtatggaccc
ggtcagtcgctaaagaacccgtacacgggaattttggcggtgttttcaaatttggcgcgt
caaaaccaggggatcgagatttacgaggatgggctcgaatcaagagactttgtgtatata
gatgacgtggttgaggccacgatccgcagtatcaactactcggatcagtttgtcggggct
ttgaacgtggggtcaggtcaggccaccagtgtgatgactgttgcgcaagaaatcaaagct
tactttgacagtagcagcaccatcaaggtcactggggcgttccgcatgggtgatattcgt
cacaacattgccgatgtgtcgaaacttgagcaagtgttgggctttgtgcctggcgtgccg
ttcaaacaaggtttggctaactttttgggctgggccgccgagcaagcgccggaggataag
gcggcctatctgcgctcggtcagcgagctgacggcgcgcgggctgatgggtaagacaacg
gcgcaatga
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