Rhodoferax ferrireducens: Rfer_1341
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Entry
Rfer_1341 CDS
T00334
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rfer_1341
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfr01007
]
Rfer_1341
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_1341
Enzymes [BR:
rfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Rfer_1341
Amino acid related enzymes [BR:
rfr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Rfer_1341
Transfer RNA biogenesis [BR:
rfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rfer_1341
Prokaryotic type
Rfer_1341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
ABD69075
UniProt:
Q21YS8
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All DBs
Position
1443990..1446422
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AA seq
810 aa
AA seq
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MQFPESWLREFCNPPLSTEQLAQTLTMAGLEVEELKPVAPPFTRIVVGEIKEAAQHPNAD
RLHVCQVDVGQAELLTIVCGAPNARVGIKVPCALVGAELPPGEDGKPFLIKVGKLRGVES
YGMLCSARELKLSNDHGGLLELRSDAPLGQDIREHLNLDDTLFTLKLTPNLAHCLSVYGV
AREVAALTGAALKAPSFPVVKVSGADRLPVKVSAPDLCGRFSGRIVRHVNPRASTPDWMV
ERLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKPGEQLKLLNGNTV
TVDDQVGVIADEAHVESLAGIMGGDATAVSDDTQNIYVEAAFWWPKAIAGRSRRFNFSTD
AGHRFERGVDPSQTVEHIERITQLVIDICGTADTTCGPMDDQQVNLPVAPTVSLRVARAS
KVIGMALTQSQCADALTRLGLAISQSDGIITVAPPSYRFDLQIEEDLIEEVARMVGYNNL
PQTPPLAPITAKVRRETQRSPFALRRSIAALGYQETINFSFVEERWEHELCANPNPIKLL
NPIASQMSVMRSSLLGSLLQVLKFNLDRKAQRVRVFELGRVFLRDAAVKNTDATVEGFDQ
PMRVAGLVCGSADALQWGHKERPVDFFDIKGDVEILLAPRRPVFESAQHPAMHPGRCARV
MLDGVAIGFVGELHPKWRQAYDLAQAPLMFELDLDALLQREVSVFKGVAKHQAVDRDIAV
MVSEKLSSHADLMDAIWSAPTAGLLRNAVLFDIYRPKSAKDLDAPGSEKSYAIRLTLNSD
DATLTEEQIDNATQAVLASLLSKLGARQRT
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcctgaatcctggttgcgcgaattctgcaacccgccactgtccactgaacaa
ctcgcgcaaacactcaccatggccggtcttgaggtcgaagaactcaagcccgttgccccg
ccgttcaccaggatcgtggtgggtgagatcaaagaagcagcgcagcatcccaatgccgat
cggctgcacgtctgccaggtggatgtggggcaggctgaactgctcaccatcgtttgtggc
gccccgaatgcccgggtcggcatcaaggtgccgtgcgccttggtgggtgcggagttaccc
cccggtgaagatggcaaaccttttctgatcaaggtgggcaagttgcgcggcgttgaaagc
tacggcatgctctgttcagcccgggaactcaaactgtcaaacgaccatggcggtttgctg
gagcttcgcagcgatgccccgctggggcaagacattcgcgagcatttgaacctggacgac
accctgtttacgctcaaactcacgcccaatctggcgcattgcctgagtgtgtacggcgtg
gcgcgtgaagtggcggctttaactggcgctgctctgaaagcgcccagctttccggttgtc
aaagtcagcggagcagacagattgccagtgaaggtcagcgcacccgatctgtgcgggcgt
ttctccggccgcatcgtgcgccacgtcaatccccgggccagcacgcccgactggatggtg
gagcggttggcgcggtgcggccagcgcagtgtcacggccttggtggatatctccaactac
gtgatgttcgagctggggcgcccgtcgcatatttttgatctggacaaaatccacggtggc
ctcgatgtgcgctggggcaagcccggtgaacaactcaaactgctcaatggcaacacggtc
acggtggacgatcaggttggcgtgattgccgatgaagcccatgtagagtcactcgcgggc
atcatgggcggtgacgcgactgcggtgtctgacgatacgcaaaatatctatgttgaagcc
gctttttggtggccgaaagccatcgccgggcgttcccgccgcttcaacttctccaccgac
gccggtcaccgctttgagcgcggtgtcgacccgagtcagaccgtggagcacatcgagcgc
atcacgcagttggtcattgacatctgtggcacggccgacaccacgtgtggccccatggac
gaccagcaggtgaatctgccggttgcgccaaccgtcagcctgcgcgtggcacgggccagc
aaagtcattggcatggcgctcacgcagtcgcaatgcgctgacgcgctgacgcgtctcgga
ttggcgatctcacagagcgatggcatcatcaccgtggcgccgccgtcgtaccgctttgac
ctgcaaattgaggaagacctgattgaagaggtggcccgcatggtgggctacaacaacctg
cctcagacaccgcccctggcaccgatcaccgccaaggttcgccgtgaaacgcagcgcagt
ccgtttgccctgcgccgcagcatcgccgcgctgggttatcaggaaaccatcaacttcagc
tttgttgaagagcgctgggagcatgagctttgcgccaacccgaatccgatcaagctgctg
aacccgatcgccagccagatgagcgtcatgcgctcgtcgctcctgggctcgctgttgcag
gttctgaagttcaacctggaccgcaaggcgcagcgggtgcgcgtctttgagctcggccgc
gttttcttgcgcgatgctgccgtcaaaaacaccgatgccacggtagaaggttttgatcag
cccatgcgcgtggcaggtctggtgtgtggcagtgccgacgcactccagtgggggcacaag
gagcggccggtcgatttctttgacatcaagggtgatgtggagattttgctggcgccacgc
cgtcctgtctttgagtctgcgcagcatcccgccatgcacccagggcgttgcgcccgcgtc
atgctcgacggtgtggcgattggcttcgtcggagagttgcatcccaaatggcggcaggcc
tacgatctggcgcaagcgccgctcatgtttgaactcgatcttgacgccttgctgcagcgc
gaggtgtccgtattcaaaggcgtggccaagcatcaagcggtggaccgtgacattgccgtg
atggtgagtgaaaagctttcatcacatgctgacctgatggacgccatttggtccgcgccc
acggcgggactgctgcgcaacgctgttttgtttgatatctatcgacccaagagtgccaag
gatctggacgcgcccggctcggaaaaaagctatgcgatacgtttaacgctcaacagcgac
gatgccacgctgaccgaagaacaaattgacaatgcgacgcaagcggtgcttgcttcactc
ctgagcaaattgggtgcgcgtcagcgaacctga
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