KEGG   Rhodoferax ferrireducens: Rfer_1367
Entry
Rfer_1367         CDS       T00334                                 
Name
(GenBank) type III restriction enzyme, res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rfr  Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rfr02048]
    Rfer_1367
Enzymes [BR:rfr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Rfer_1367
Prokaryotic defense system [BR:rfr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Rfer_1367
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 ResIII DEAD HSDR_N NACHT AAA_22 DUF815 TsaE AAA_16 KAP_NTPase
Other DBs
NCBI-ProteinID: ABD69101
UniProt: Q21YQ2
LinkDB
Position
1472554..1476423
AA seq 1289 aa
MAHGFKESDFQNGIFIPYLTAPQPGGLDWIQGKPTDIDAARWIVPGDLLHFLRDGCPLNV
AAFAKASKGYGSDMDFLQAFLLDALLPKIEAKANAAFVLRESITFAGQSFVLWNEAPRTG
ADSGAADLFKKNYLRVIPEAPFERVFPHSNKRIKRRPDVVFFVNGLYLSYAELKTAQTGQ
TAAGHGRKKIAHDCIEAGSAALQEARERYAAQGGKWPGFRHRDLREKERQEIRQSICLYE
KAAHISCVDMGAMMILSDIEWLLPEIDDAIEANDTQALVETLPGKVMDAFMRAAEMRDKP
ASEALADHLASFFSAADGVDREIYFFNQIRPSRTTTGTEILRPRPAQRAMLHQSVKRVCA
LYADESKSKINEPDIRAALAESLPDLDPKKVNEIVAKTLLHRNGQESHSILLQGAAGLGK
TNVIVWLAQALSDMPDPRSKAASPLFDLCILLTDRTELRQNVAEEAARLGATKNIVAEAE
TFKGLYDSLQDGARVVVVNIQKFPSIKRLAQDDAALSKLLTGKRVAFIIDEVHRSQGGVL
HDATIEIFDEWGSLRPAGAKRNLIIGLTATPRDEVLARFGEWRAPRAAGDDIRWAPYFAY
TMTQAIRERVILNPIQNVIRFEDHLQYRITDTVQKLRPGDELRPPSSDEIYQNPDRQSMV
AKNAALVFVAKTMMAIRPPGGRALGDGKAMFAAHSIKAAIAYQPLLRAELDKLADDPRFV
EHAQAIKATPVLLLYTDKQGEASCASLNGGRNQDAIIDEFRRKGEGAKQGAKVHNALIVV
VDKLLTGFDEPTLHTLFIDRGMDDVLLFQAACRVNRWRKWKNDCLLVDFSHDGVVSKNLP
KVFAKYGGLTVSSLDAMELKDKMDAAFKVFFDEKDINAHWRAWKATSSGGKDQESATGLS
DFLDGLVKNEVERAKTIRKAGSAWLSSRERLSGILDFTKPALAKHADEKRAAFAEQVVKH
LASKLRDDDDRVGAVFDIDLVEDAVGWGLDELPEAEEKKKKPKGEAGLPHSVGGLMSSLD
AIELLAALQLTEQQKLQLIEKLKSFLIALFQVIDNEGAKRNNDIHRKMIQAMANEGADFP
WDERFTKFKGLLDTTATNLKILTHPDRKALLLPLLKRPELMMADYEEWVVSEGASIAMGD
QPVEREVVKTSASKVLDELRSIKQRSAEFLRLQLGVDSKWSQINDAFWSVIVKSDRRVLC
LADLSPIADAGGWQQSELLAVLGLLGAPKAALLRMELRAPDGTEVPAEEVSQKLAAWWKS
KTMTDAEWKAWASQYAVSWSPVVAQGAAK
NT seq 3870 nt   +upstreamnt  +downstreamnt
atggcacacggtttcaaggaaagcgactttcagaacggcattttcatcccctacctgacc
gcgccccaaccaggtggactggactggatacagggaaagcccaccgacatcgacgccgcg
cgctggatcgtgccgggggatttgctgcactttctgcgcgacggctgcccgctgaatgtt
gctgcctttgccaaggccagcaaggggtacggctccgacatggattttttgcaagccttt
ctgcttgatgcgttgttgcccaagatcgaggccaaggcgaatgccgcttttgtgctgcgc
gagagcatcacctttgccgggcagtctttcgtgttgtggaacgaagcgccgcgcaccggg
gcagattccggcgcggcggacctgttcaagaagaactacctgcgcgtgatccccgaagcg
ccgttcgagcgcgtctttccgcacagcaacaagcgcatcaagcgccgccccgacgtggtg
tttttcgtcaatgggctgtacctctcctatgccgagctgaaaaccgcgcagaccgggcag
accgccgccgggcacgggcgcaagaagattgcccacgactgcatcgaggcgggcagcgcg
gccttgcaggaggcgcgcgagcgctacgcggcacagggcggcaagtggccgggctttcgc
caccgcgatctgcgcgaaaaggagcgccaggaaatccgtcagtcgatatgcctgtacgaa
aaagccgcgcacatcagttgcgtggacatgggcgcgatgatgatcctgtcggacatcgaa
tggctgctgccggaaatcgacgacgccatcgaggccaacgatacccaggcgctggtggag
acgttgccgggcaaggtgatggacgccttcatgcgcgccgccgagatgcgcgacaagcct
gcctcggaggcgctggccgaccatctggcctcgtttttttccgctgcggatggcgtggat
cgggagatctatttcttcaaccagatacgccccagccgcaccaccaccggcaccgagatt
ctgcgcccccgcccggcgcagcgggcgatgctgcatcagtcggtcaagcgggtgtgcgcg
ctgtacgccgacgagagtaaatccaagatcaacgagccggacatccgcgcggcgctcgca
gaatcgttgcccgacctcgacccgaaaaaggttaacgagatcgtggccaaaaccctgctg
caccgcaacgggcaggagtcgcattccatcctgttacaaggcgctgccgggctgggaaaa
accaatgtgattgtctggctggcgcaggcgctttcggacatgcccgacccgcgcagcaag
gcggcatcaccgctgttcgatttgtgcatattgctcactgaccgcaccgagctgcgccag
aacgtggcggaagaggcggcgcgcctgggggcgaccaagaacatcgtcgccgaggcggaa
accttcaaggggctgtacgacagcctgcaagacggagcgcgggtggtagtggtgaatatc
cagaaattcccctcgatcaagcggctggcgcaggacgatgcagcgctgtccaagcttctg
actggcaagcgggtagcgttcatcatcgacgaggtgcatcgctcgcaaggcggtgtattg
cacgatgcgactatcgaaattttcgacgagtggggcagcctccgtccggcgggcgccaag
cgcaatctcatcattggcctgacggccaccccgcgcgacgaggtgcttgctcgcttcggc
gaatggcgtgcgccacgggcggcgggggatgacatccgctgggcgccgtatttcgcctac
accatgacgcaggcgattcgcgagagggtgattctgaacccgatacagaacgtgatccgc
ttcgaggatcatttgcagtaccggattaccgacacggtgcagaagctgaggcccggcgat
gagttgcgcccgccgagttcggacgagatttaccagaacccagaccggcaaagcatggtc
gccaaaaatgcggcattggtgtttgtggccaagaccatgatggcgatacgcccgccggga
gggcgcgccctgggcgatggcaaggcgatgttcgcggcgcattcaatcaaggcggcgatt
gcctatcaaccgctgctgcgcgctgagctggacaagctggcggacgatccgcgcttcgtc
gagcacgcgcaggcaatcaaggccacgcccgtgctgctgctttataccgacaagcagggg
gaagcctcatgcgcttccctcaacggcggcaggaatcaggatgccatcatcgacgaattc
cgccgcaagggtgaaggggcgaaacagggcgcgaaggtgcataacgcgctcatcgtggtg
gtggacaagctgctgaccggctttgacgaaccgacgctgcacacgctgttcatcgaccga
ggcatggacgatgtgctgctgttccaggccgcctgccgcgtgaaccgctggcgcaagtgg
aaaaacgattgcctgctggtggatttctcccatgacggcgtagtctcgaaaaacttgccc
aaggtgtttgccaagtatggcggcctcacggtttcgagcctggacgcgatggagttgaag
gacaaaatggacgcggcgttcaaggtttttttcgatgaaaaggacatcaatgcccattgg
cgcgcctggaaggccacttcatccggcggtaaggatcaggaatcggcaaccggcctttcg
gattttctggatgggctggtgaagaacgaagtggagcgcgccaagaccatcagaaaggcc
ggttcagcctggttgtccagccgcgagcggttatccggcattctcgacttcaccaaaccg
gcactggccaagcacgccgacgagaagcgggcagcgttcgccgaacaggtggttaagcat
ctcgccagcaagctgcgtgacgatgatgatcgcgtcggcgcggtgttcgacatcgacctg
gtggaggatgcggtcggttggggcctggatgaactcccggaggccgaggagaaaaagaaa
aaacccaagggcgaggcgggcttgccgcattccgtgggcgggttaatgtcctcgctggac
gccattgaattgctcgccgccttgcagctcaccgaacaacaaaagctccagctcatcgaa
aagctaaagtcgtttctgattgcgttgtttcaggtcatcgacaacgaaggcgcgaagcgc
aataacgacatccaccgcaagatgattcaggcgatggcgaacgagggcgcggattttcca
tgggatgagcgctttaccaaattcaaggggctgctggataccacggccaccaatttgaaa
atactcacccaccctgaccgcaaagcgctgctgctgccactgttgaagcggcctgaactg
atgatggcagactatgaagagtgggttgtgtcggagggggcttcaattgcgatgggcgac
cagcctgttgaacgcgaagtagtcaaaacaagtgcatcgaaagtgctcgacgagctcaga
agcatcaagcagagatcggctgagtttcttcggctacagctcggagtcgattcgaagtgg
agccaaatcaatgacgccttttggtctgtcattgtgaaaagtgaccgaagggtgctttgc
cttgcggatttgagccccattgcggacgctggcgggtggcagcaatcggagctattggcg
gtgctgggtttgcttggagcgcccaaggccgcacttttgcgtatggaattgcgtgcacca
gacggcactgaagttccggcagaggaggtgtcgcaaaagctggctgcgtggtggaagagt
aagaccatgacggatgccgaatggaaagcgtgggcatcgcaatatgcggtgtcatggtca
cccgtggtagcgcaaggagcagccaaatga

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