Rhodoferax ferrireducens: Rfer_1391
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Entry
Rfer_1391 CDS
T00334
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00630
Glyoxylate and dicarboxylate metabolism
rfr00710
Carbon fixation by Calvin cycle
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
Module
rfr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rfer_1391
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Rfer_1391
Enzymes [BR:
rfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Rfer_1391
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ABD69124
UniProt:
Q21YM9
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All DBs
Position
complement(1502903..1504282)
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AA seq
459 aa
AA seq
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MDQSKRYADLSLQEAALIAGGQHILCAYKMAPKDGLNYLEAAAHFAAESSTGTNVEVCTT
DDFTRDVDALVYYVNEATEDMRIAYPLALFDRNITDGRFMLVSFLTLAVGNNQGMGDIKH
AKMIDFYVPERVIQMFDGPAKDISDLWRILGRPVKDGGFIVGTIIKPKLGLRPEPFAQAA
YQFWLGGDFIKNDEPQGNQVFSPIKKTLPLVYDALKRAQDETGQAKLFSMNITADDHFEM
CARADFALETFGADADKLAFLVDGFVGGPGMVTTARRQYPNQYLHYHRGGHGMVTSPSSK
RGYTALVLAKMSRLQGASGIHVGTMGHGKMEGAGDDRVMAYMIERDECQGPVYFQKWYGI
KPTTPIVSGGMNALRLPGFFDNLGHGNIINTAGGGSYGHLDSPAAGAVSLRQAYECWKAG
ADPIEWAKEHREFARAFESFPQDADRLFAGWRDKLGVGA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatccaagcgctacgctgacctaagcctccaggaagccgccctcattgcaggg
ggccagcacattctgtgcgcctacaaaatggcccccaaagacgggctgaattatctggag
gccgcggcccactttgccgccgagtcctcgaccggcaccaacgtggaggtgtgcaccacc
gacgatttcaccagagatgtggacgcgctggtgtactacgtcaatgaggccaccgaggac
atgcgcattgcctacccgctggcgctgtttgaccgcaacatcaccgacgggcgcttcatg
ctggtgtccttcctgacgctggctgttggcaacaaccagggcatgggtgacatcaagcac
gccaaaatgatcgatttttacgtgcccgagcgcgtcatccagatgtttgacggaccggcc
aaagacatcagcgatttgtggcgcattttgggccgcccggtcaaagacggcggctttatt
gtcggtaccatcatcaaacccaaactcggtctacgccccgaaccgtttgcccaggcggct
taccaattctggctggggggcgacttcatcaaaaacgacgagccgcaaggcaaccaggtg
ttttcgccgatcaaaaagaccttgccgctggtgtatgacgcgctcaagcgcgcccaggac
gaaaccggccaggccaagctgttctcgatgaacatcacggccgacgaccattttgaaatg
tgtgcccgcgctgactttgcgctggaaacctttggcgccgacgccgacaaactggcgttt
ctggtcgatggttttgtcggcggccccggcatggtcaccactgctcggcgccagtacccc
aaccaatacctgcactaccaccggggcggccacggcatggtgacatcgccctcatccaag
cgcggctacaccgccttggtgctggccaagatgagccgcctgcagggcgcctcgggcatc
cacgtcggcaccatggggcacggcaagatggaaggcgcgggcgacgaccgggtgatggcc
tacatgattgagcgcgacgagtgccaggggccggtttatttccagaagtggtacggcatc
aagccgaccacgccgatcgtctcgggcggcatgaacgcgctgcgcctgccgggcttcttt
gacaacctgggccacggcaacatcatcaacaccgcaggcggcggctcttacggtcacctt
gactcacccgccgctggtgcggtttctctgcgccaggcctacgaatgctggaaggccggt
gccgacccgattgaatgggccaaagagcaccgggaatttgcccgcgcttttgaatccttc
ccgcaagacgcggatcggctgtttgcgggctggcgcgacaagttgggcgtcggcgcctga
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