Rhodoferax ferrireducens: Rfer_1457
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Entry
Rfer_1457 CDS
T00334
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr03030
DNA replication
rfr03430
Mismatch repair
rfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rfer_1457
03430 Mismatch repair
Rfer_1457
03440 Homologous recombination
Rfer_1457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfr03032
]
Rfer_1457
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_1457
Enzymes [BR:
rfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rfer_1457
DNA replication proteins [BR:
rfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rfer_1457
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rfer_1457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_16
Rad17
AAA_19
nSTAND3
TsaE
PIF1
SKI
AAA_28
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ABD69190
UniProt:
Q21YG3
LinkDB
All DBs
Position
1566918..1568861
Genome browser
AA seq
647 aa
AA seq
DB search
MSYLVLARKYRPRNFTEMVGQDHVVQALTNALTTQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGPDGQGGITATPCGVCQACIDIDSGRFVDYTELDAASNRGVDEVQALLEQAVYKP
VQGRFKVFMIDEVHMLTGHAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPIAPETIREHLQTVLQAEKVAADVPSLRLLARAAHGSMRDALSLADQAISFGAGQIEEA
TVRQMLGSVDRSYVFRLLEALAQGDGKTVVETSEALRLNGLSAASTLEEMSMVLQRMAVV
QAVPSAVESDETDPQALDVARLAALMPADETQLLYSICLHGRAELGLAPDEYAALTMVLL
RLLAFKPRAGNLPVAEKKTLTDAPRGLAAAAPRPVPALGQVVTEVPVFEKKETPAPVEYS
QSAIKIVANAEAQINTEEKVESEVHAEAEALQPPPTGQHLHVVQLPVAAGQSLTSEQNRP
LAPVEYAQDAAKIVAIPVRVQADSRAEAVAGQSAASLLLPTEEGEFWHGIVRQLIAREAI
NAMVRELALQSQLVARDTDQWLLRVERESLNQSGSRDRLATALQAAGYAVRLVVEIGRVT
DSPARRNAALVAERQLAAEKIIFDDPFVQAMMRDFGAKIVPGSITPG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctcgtgctcgcccgcaagtaccgcccccgcaacttcactgaaatggtgggg
caggaccacgtggtgcaagcgctcaccaacgcgctcaccacgcagcggctgcaccacgct
tatttattcaccggcacgcgtggtgttggcaagaccacggtgtcgcgcattttggccaag
tcgctcaattgccaggggccggacgggcagggcggcatcacggccacgccgtgtggcgtg
tgccaggcgtgcatagacattgattccggccgctttgtcgattacaccgagctcgacgcg
gcctccaaccggggtgttgacgaagtacaggcgctcctggaacaggccgtctacaagccg
gtgcaggggcgcttcaaggtcttcatgatcgacgaggtgcacatgctcaccggacatgcc
ttcaacgccatgttgaagacgctggaggagccgcccgagtacttgaaatttgtgctggcc
accaccgacccgcagaaggtgccggtcacggtgctgtcgcgctgtctgcagttcaacctg
cgcccgatagcgcccgagaccatccgtgagcacctgcaaacggtcttgcaagccgagaaa
gtggcggccgatgtgccgtcgctgcggctgctggcgcgtgcggcgcacggctccatgcgc
gatgccttgagtctggctgatcaggcgatttcgtttggtgccggccagattgaagaagcg
acggtgcgccagatgctgggcagcgtggaccgctcctatgtgtttcggctgctggaggcg
ttggcccagggagacggcaaaacggtggtcgagacgtctgaggccttgcgtctgaatggc
ctgagtgcggcctccacgctggaagaaatgagcatggtgctgcagcgcatggccgttgtg
caagcggtgcccagcgccgttgagtcggatgaaaccgacccgcaagcgctggacgtggcg
cgtctggcagcactcatgcctgccgacgagacgcagttgctctacagcatctgcctgcat
gggcgcgcggagttgggcctggcgccggacgagtacgccgcattgaccatggtgttgctg
cgactgctggcgttcaaaccccgcgctggcaatctgcctgtggctgaaaaaaaaacttta
actgacgcgccgcgggggcttgctgcagccgcaccccgtccagttccagcgctggggcag
gtggtgaccgaggtgcctgtttttgagaaaaaagagactccagcccccgtcgaatattcg
cagtcagctataaaaatagtagcaaacgcagaagcgcagatcaatacagaagaaaaggtt
gaatcagaggttcacgcagaggcagaggcattgcagccacccccaacgggtcagcatctg
catgtggtccagctaccggtggctgcgggacagtccctcacttctgagcaaaatagacct
ctagcccccgtggaatatgcgcaagatgctgcaaaaatagtagctattccggtgcgcgtg
caggccgattcccgcgccgaggcggtggctggacagtcggctgcgtctttgttgcttccc
accgaagagggcgagttctggcacggcatcgtgcgccaactcatcgcccgggaagcgatc
aacgccatggtgcgcgaactggccctgcagtcgcaactggtggcgcgcgacaccgaccag
tggctgttgcgggtcgagcgcgaatcgctgaaccagtcgggtagccgtgaccgtctggcg
actgcgttgcaggcggcgggttacgcggtgcgcttggtggtggagattgggcgcgtgacc
gacagcccggcccggcgtaacgcggcgctggtggccgagcggcagctggcggcagaaaaa
atcatttttgatgatccgtttgtgcaggcgatgatgcgtgattttggcgcgaaaatcgtg
cctggcagcatcacaccaggctga
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