Rhodoferax ferrireducens: Rfer_1563
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Entry
Rfer_1563 CDS
T00334
Name
(GenBank) putative transmembrane protein
KO
K19804
lipopolysaccharide assembly protein B
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
Rfer_1563
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
Zn_ribbon_LapB
TPR_7
TPR_16
TPR_2
TPR_14
TPR_17
TPR_11
TPR_12
ANAPC3
TPR_Slam
DUF7017
TPR_21
TPR_20
TPR_4
Zn_ribbon_8
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ABD69295
UniProt:
Q21Y58
LinkDB
All DBs
Position
complement(1689163..1690320)
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AA seq
385 aa
AA seq
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MDFDLSWILLGLPLAFVLGWVASRLDLRQLRIENHQAPKAYFRGLNFLLNEQQDQAIDAF
IEAVQSDPDTSELHFALGNLFRRRGEYERAVRVHEHLLSRGDLNLLDRQRAQHALALDYL
KAGLIDRSEEALLKLEGTPFEAQARLALLANYERSRDWLRAAQIAQKLEHANQGSFQGRL
AHYLCEQAAESLTAQEPEQANSLLQQALSTAPDAARPPIDLAQLLARQGQPEEAYLLLKR
SLQSAPAATPLIAAPLTDYAIACGRAPEALTLLKTSYAHSPSLDVLDAIVLLEAGHGGPT
PTARDWYVQHLEREPSLVAAAKWLAGEKLEHEQFHPQVQRALEQAIKPLMRYRCAACGFE
AKQHFWQCPGCQAWDSYPARRIEEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggactttgacctgagttggatactgctgggcctgccgctggcctttgtgttgggctgg
gtcgcctcgcgcctggatctgcgccaactgcgcattgaaaaccatcaggccccaaaagct
tacttcaggggtttgaactttttgctcaatgagcaacaggaccaggcgattgatgccttc
atcgaggccgtccaaagcgaccctgacacgtccgagctgcactttgcgctgggcaacctg
tttcgacgccgtggcgaatatgaacgtgcggtgcgcgtgcatgaacatctgttgtcgcgt
ggcgacttgaacctgcttgatcgccagcgtgcgcagcacgcattggcactggactatctc
aaagctggcctgatcgaccgttctgaagaggccttgctcaagctcgaaggaaccccgttc
gaggcgcaggcgcgcctcgccctgctggccaactacgagcgcagccgcgactggctgcgc
gccgcgcagatcgcgcaaaaactggaacacgccaaccagggaagctttcagggccgtctg
gcgcattacctgtgtgagcaggcggctgaatccctcactgcccaagagcctgaacaagcc
aattctttgttgcaacaagctctgagcacggcgccagacgcggcacgacccccgattgac
ctggcccagttgttggcgcgccagggccaacccgaagaagcctatttgctgctcaaaaga
tctttgcagtctgcgcctgcggccacccccctgatcgcagcaccactgaccgactacgcc
atcgcttgcgggcgcgcccctgaagccctgaccttgctcaagacctcttacgcgcattcc
ccctcgctggacgtgctcgatgccatcgtcctgctggaggccggccacggcgggcccacg
cccactgcacgtgactggtatgtgcagcatctggagcgcgagccgtcgctggtcgctgcc
gccaagtggcttgctggtgaaaaactcgaacacgagcaatttcatccgcaggttcaacgc
gcactggaacaggccatcaagccgctcatgcgttaccgttgtgctgcttgcggcttcgag
gccaagcaacacttctggcaatgtcccggctgccaggcgtgggacagttatccggcccga
agaatcgaggagctatga
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