Rhodoferax ferrireducens: Rfer_1571
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Entry
Rfer_1571 CDS
T00334
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfr03032
]
Rfer_1571
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_1571
Enzymes [BR:
rfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rfer_1571
DNA replication proteins [BR:
rfr03032
]
Prokaryotic type
DNA Topoisomerases
Rfer_1571
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rfer_1571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABD69303
UniProt:
Q21Y50
LinkDB
All DBs
Position
complement(1698030..1700672)
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AA seq
880 aa
AA seq
DB search
MTQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHELLADLDKETVDFGPNYDGSEKEPLVLPTRLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPEASIDELMEIIPAPDFPTAGIIYGIQGVKDGYRTGRGRV
VMRAKVHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPKLCNLKDLIKVFLQHRRE
VVTRRTVFNLRKARERGHVLEGLAVALANIDEFIAIIRNAPTPPVAKVELMAKPWDSKLV
REMLTRTRADGGVINADDYRPDGLEKMYGMGSDGLYRLSDTQAQEILQMRLQRLTGLEQD
KIVAEYKEVMGEIEDLLDILAKSERVSTIIYEELTAIKTEFGQTKLGARRSLVEHSSFDL
STEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD
YILCFSNRGRLYWLKVWEVPQGSRGSRGRPIVNMFPLQEGEKINVVLALTGEKRSFPADQ
YVFMATSMGTVKKTPLDEFSNPRKGGIIAVGLDEGDYLIGAALTDGKHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMMLEDGQGVIAMLVAEDELQSVLTATVNGYGKRTSITEYTR
HGRGTKGMIAITQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT
LIGLDEGSKLSGLQRIVENDANPVADETPGDDQDDTSSTD
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacccaattcgccaaagaaaccctgcccgtcagccttgaagaggaaatgcggcgcagt
tacctcgattacgccatgagcgtgattgtgggccgtgccctgcccgatgcgcgggacggt
ttgaaaccagtgcatcgccgtgtgctgtttgcgatgcacgaactcaataacgactggaac
cggccgtataagaaatcggcacgtatcgtcggcgacgtgattggcaagtaccacccgcac
ggtgaccagtctgtctacgacaccatcgtgcggatggcgcaggatttttccatgcgccac
atgctggtcgacgggcaaggcaactttggctcggtcgacggcgacaacgcagcggccatg
cgttacaccgaaatccgcctgtccaagatcgcccacgagctgctggctgatctggacaag
gagaccgttgatttcggccccaattacgacggttccgaaaaagaaccgctggtgctgcca
acccgcctgcccaacctgctggtcaacggctccggtggcattgccgtgggtatggccacc
aacatcccgccgcacaacctgaatgaagtggtggatgcctgcctgcacctgctgcgcaac
ccggaggcctcgattgacgaactgatggagatcattccggcgcccgatttccccaccgcc
ggcatcatttacggcatccagggtgtcaaggacggctatcgcaccggtcggggtcgggtg
gtgatgcgcgccaaggtgcatttcgaagacatcgacaaaggccagcgccagtccatcatc
gtcgacgagctgccctaccaggtcaacaaaaagacactgcaagagcgcatggccgaactg
gtgcacgagaagaaaatcgagggcatcagccacatccaggacgaatccgacaaatccggc
atgcggctggtgattgaactcaagcgcggcgaggtgcccgaggtggtgctcaacaacctg
tacaagcaaacgcagctgcaggacacctttggcatgaacatggtggcgctgatcgacggc
cagcccaagctgtgcaacctcaaagacctgattaaagtgtttttgcagcaccgccgcgag
gtggtgacccgtcgcacagtgttcaatctgcgcaaggcgcgcgagcgcggccacgtgctc
gaaggcctggccgttgcgctggccaatatcgacgaattcatcgccatcatccgcaacgcc
cccacaccaccggtggccaaggtcgaactgatggccaagccctgggacagtaaattggtg
cgcgaaatgctgacccgcacccgcgccgacggcggcgtgatcaacgccgacgactaccgc
cccgacggcctggagaagatgtacggcatgggcagcgatggcctgtaccgcctgtccgac
acgcaggcgcaggaaattctgcagatgcgtttgcagcgcctgaccggcctggagcaggac
aaaatcgtcgccgaatacaaagaggtgatgggcgagatcgaagacttgctcgacattctt
gccaagtccgaacgggtctccaccatcatttacgaagaactcaccgccatcaagaccgag
tttggccaaaccaaactgggcgcgcggcgcagcctggtggagcacagctcgtttgacttg
agcacggaagacctgatcacgcccaccgacatggtggtgacgctctcgcacagcggctac
atcaagagccagccgctgagtgaataccgggcgcaaaagcgcggcgggcgcggcaagcaa
gccaccgccaccaaagaagacgactgggtcgaccagctcttcattgccaacacgcacgat
tacatcctgtgtttcagcaaccggggtcgtctctactggctcaaggtttgggaagtgccc
cagggctcgcgcggttcacgcgggcgcccgatcgtcaacatgtttccgctgcaagagggt
gaaaagatcaatgtggtgctggcactgaccggcgagaagcgcagcttccccgctgaccag
tacgtgttcatggccacctccatgggcaccgtcaagaaaacaccgctggacgaattcagc
aacccgcgcaagggcggcatcatcgccgtcggcctggatgagggcgactacctgatcggc
gccgcgctgaccgacggcaagcacgacgtgatgttgttcagcgatggtggcaaggcggtg
cgctttgacgagaacgatgtgcgcccgatgggccgcaatgcccgaggcgtgcgcggcatg
atgctggaagacggccagggcgtgatcgccatgctggtggccgaggatgagttgcaaagc
gtgctgaccgcgaccgtcaacggctatggcaagcgcaccagcatcaccgagtacacccgc
catggccgcggtaccaagggcatgattgccatcacccagtccgaacgcaatggcaaagtg
gtggccgccaccctggtgcatgccgacgacgaaatcatgctgatcaccgacaagggcgta
ctggtgcgcacccgtgtctccgaaattcgcgaactgggccgcgccacgcagggcgtgacg
ctgattgggctcgacgaaggctccaaattgagcggactgcagcggattgtcgaaaatgac
gccaacccggtggctgatgaaacccccggtgacgatcaggacgacaccagcagcaccgac
taa
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