Rhodoferax ferrireducens: Rfer_1708
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Entry
Rfer_1708 CDS
T00334
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00730
Thiamine metabolism
rfr01100
Metabolic pathways
rfr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Rfer_1708
Enzymes [BR:
rfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Rfer_1708
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABD69437
UniProt:
Q21XR6
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Position
1837996..1839870
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AA seq
624 aa
AA seq
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MNAPDKFSQLMSLTREPLPASRKIYVPGTQADIQVPMREIMQSNGEAVVVYDTSGPYTDP
NANIDVRQGLPSVRSPWIESRGDTESYTGRTPFALDDGLKNGDSESLASLRVQAAGLQRT
PRRAKAGANVSQMHYARSGIITPEMEYVAIRENQKLAWMEQYLGNAEREARLAGNSFGAN
IPKIMTPEFVRDEVARGRAIIPANINHPEVEPMVIGRNFLVKINANIGNSAVTSSIEEEV
EKLVWSMRWGADTVMDLSTGRNIHTTRDWILRNSPVPIGTVPIYQALEKVGGVAEDLTWA
IFRDTLIEQAEQGVDYFTVHAGVRLAFIHLTANRMTGIVSRGGSIMAKWCIAHHKENFIY
SHFDEMTEILKAYDVSYSLGDGLRPGSGADANDEAQFAELRTLGELTQQAWQQDVQVMIE
GPGHVPMHMVQANMTEQLKACHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAML
CYVTPKEHLGLPDRDDVKVGIITYKIAAHVADVAKGHPGVRARDDALSKARFEFRWMDQF
NLSLDPDTARNFHDETLPKDSSKVAHFCSMCGPKFCSMKISQEVRDYAKTRGVSEEQALQ
SGMQTKSEEFRLAGGEMYIPISPA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacccgacaaattcagccagttgatgagcctcacgcgcgagcccctgccggcc
tcgcgcaagatctacgtgcccggcacgcaagccgatattcaagtgccgatgcgtgaaatc
atgcagagcaacggcgaggccgtcgtggtgtatgacacctccggcccctacaccgatccg
aatgccaacatcgacgtgcgccagggcctgccctcggtgcgcagtccctggatcgaatcg
cgtggtgacaccgagtcctacaccggccgcacgccctttgcactggacgatggactgaag
aatggcgactctgaatcattggcatccttgcgcgtgcaggctgcgggcctgcagcgcacg
ccgcgccgcgccaaagccggtgccaacgtgtcgcagatgcattacgctagatccggcatc
atcacccccgagatggaatacgtcgccatccgcgagaaccagaagctggcgtggatggag
cagtacctgggcaatgccgagcgcgaagcacggctggcgggcaacagcttcggcgccaac
atcccgaagatcatgacgcccgagttcgtgcgcgatgaagtggcccgtggccgcgccatc
atcccggccaacatcaaccaccccgaagtcgagccgatggtgattggccgcaacttcctg
gtcaagatcaacgccaacatcggcaactcggccgtgacatcgagcatcgaggaagaagtc
gaaaaactggtgtggtcgatgcgctggggcgccgacaccgtgatggacctgtccaccggc
cgcaacatccacaccacgcgcgactggattctgcgcaactcgccggtgccgatcggcacc
gtgccgatttaccaggcgctggaaaaagtcggcggcgtggccgaagacctgacctgggca
atcttccgcgacacgttgatcgagcaagccgagcagggcgtcgattacttcaccgtgcac
gccggcgtgcgcctggccttcatccacctcacggcgaatcgcatgaccggcatcgtgtcg
cgcggcggctcgatcatggccaagtggtgtattgcccaccacaaagagaatttcatctac
agccactttgatgaaatgaccgaaatcctgaaggcctacgacgtgagctactcattaggc
gatggcctgcgccccggttccggtgccgatgccaatgacgaagcgcagttcgccgaattg
cgcaccctgggtgaactcacgcagcaagcctggcagcaggacgtgcaggtgatgatcgaa
ggccccggccatgtgccgatgcacatggtgcaggccaacatgaccgagcagctaaaagct
tgccacgaagcgccgttctacaccctggggcccctgaccaccgacatcgcgcccggctac
gaccacatcaccagcggcattggcgcggccatgatcggctggttcggcaccgccatgctg
tgttacgtcacgcccaaggaacacctgggtttgccggatcgcgacgacgtcaaagtgggc
atcatcacctacaagattgcagcccatgtggccgacgtggccaagggtcatcccggcgtg
cgggcgcgtgatgacgcgctgtccaaagcacgcttcgagttccgctggatggaccagttc
aacctgtcgcttgaccccgacacggcgcgcaactttcacgacgaaactttgcccaaggac
tcgtcgaaagtggcgcatttctgctccatgtgcggacccaagttctgctccatgaaaatc
tcgcaggaggtgcgcgactacgccaagacccgcggcgtgagcgaggagcaggcgctgcag
tctggcatgcaaaccaagtccgaggagttcagactagccggtggagagatgtacatcccg
atcagtccggcttga
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