Rhodoferax ferrireducens: Rfer_1799
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Entry
Rfer_1799 CDS
T00334
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00020
Citrate cycle (TCA cycle)
rfr00190
Oxidative phosphorylation
rfr00650
Butanoate metabolism
rfr00720
Other carbon fixation pathways
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
Module
rfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rfer_1799
00650 Butanoate metabolism
Rfer_1799
09102 Energy metabolism
00190 Oxidative phosphorylation
Rfer_1799
00720 Other carbon fixation pathways
Rfer_1799
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Rfer_1799
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
FAD_binding_3
HI0933_like
GIDA
Lycopene_cycl
NAD_binding_8
Pyr_redox_3
GMC_oxred_N
NAD_binding_7
FAD_oxidored
ThiF
Motif
Other DBs
NCBI-ProteinID:
ABD69528
UniProt:
Q21XH5
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All DBs
Position
complement(1936798..1938603)
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AA seq
601 aa
AA seq
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MTATSKITKRKFDVVIVGAGGAGMSASLQLANAGLNVAVLSKVFPTRSHTVAAQGGIGAA
LGNMAEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQ
RPFGGHSSNYGEKPVGRACAAADRTGHAMLHTLYQQNVKARTNFFVEWMALDLIRDADGD
VVGVTALEMETGEVYILQAKTVMIASGGAGRIFAASTNAYINTGDGLGMAARAGIPLQDM
EFWQFHPTGVAGAGVLLTEGCRGEGAILRNSNGERFMERYAPTMKDLAPRDFVSRCMDQE
IKEGRGCGPNKNYINLDMTHLGAETIALRLPSVFEIGHNFANVDITKEPIPVIPTNHYQM
GGIPSNISGQVVVPSSSGAQVVVNGLYAVGECACVSVHGANRLGTNSLLDIVVFGRAAGL
HIIDFNNKNTEHKPIPANAADISIERLDRLNTATTGEYAQVVAGDMRDIMQQHASVFRTQ
ASMDEGVVKIAQLRQRVTDIKLTDKSQIFNTERIEALEVENMIEVAQSTMVSAAARHECR
GAHSVMDYDRPADDATCPLGRDDVNWLKHTLWDKATNSLSYKPVNLKPLTVASVPPKIRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactgctacttccaaaattaccaagcgcaaatttgacgtcgttatcgtcggtgctggc
ggcgctggcatgagcgcctcgcttcaactggccaatgccggcctgaacgtcgcggtgctg
tccaaggtattcccgacacgatctcacaccgttgcagcacagggcggcatcggcgccgcc
ctaggcaacatggccgaggataactggcattatcacttttacgacaccatcaaggggtcg
gactggttgggcgaccaagatgcgattgagttcatgtgccgcgaggcgcccaaagtggtt
tacgaactcgaacacttcggcatgccgtttgaccgcaatcctgatggcaccatttaccag
cgtccttttggggggcattccagcaactatggcgaaaaaccagttgggcgcgcctgcgca
gcggcggaccgcacaggtcatgccatgctgcacacgctgtatcagcaaaacgtcaaggcg
cgaaccaatttctttgtcgagtggatggcgctggatctgattcgcgacgccgatggcgat
gtcgttggcgtcacggcactcgagatggaaaccggtgaagtctacattttgcaggcgaag
acggtcatgatagcgtcaggtggcgccggtcggatttttgccgcatcgaccaacgcctac
atcaatacgggtgatgggctggggatggcggctcgcgccggcattcctttgcaagacatg
gagttctggcagtttcaccccacgggcgtggctggcgcaggcgtcctgctcaccgaaggc
tgtcgtggtgaaggcgcgattctgcgcaacagcaatggagagcgcttcatggagcgttat
gcacccaccatgaaggacttggcgccccgcgactttgtgtcgcgctgcatggaccaggaa
atcaaggaaggacgcggttgcggcccgaacaagaactacatcaacctggacatgacgcac
ctgggtgccgagacgatcgcgctgcgcttgcccagcgtgtttgaaatcggccacaacttt
gccaatgtcgacatcaccaaagagccgatcccggtgattccgaccaaccattaccagatg
ggcggcattcccagcaatatcagcggtcaggtcgttgtgcccagcagcagtggggcgcag
gtagtcgtcaacggtctgtacgctgtgggcgaatgtgcctgtgtcagcgtgcacggcgca
aatcgactaggcaccaactccttgcttgacatcgtggtttttggccgtgctgcaggcctg
cacatcatcgatttcaacaacaagaacacggaacacaagccgataccggccaatgccgcg
gatatttccatcgaacgccttgaccggctcaacacggccacgacaggagaatacgcgcag
gttgtcgctggcgacatgcgcgacatcatgcagcagcacgccagcgtgttccgtacccag
gcgagcatggacgaaggcgtcgtcaagattgcccaattgcgccaacgcgtcaccgatatc
aagctgaccgacaagtcgcaaatcttcaacactgagcgcatcgaggcactcgaagtggaa
aacatgattgaagtggctcagtcaaccatggtgtcggcagcggcacggcatgaatgccgt
ggtgctcacagcgtgatggattacgaccgtcccgctgacgacgccacctgtccattggga
cgagacgatgtcaattggctcaaacacacattgtgggacaaagccaccaacagtctgagc
tacaagccagtcaacctcaaacccctgactgttgcctccgtaccgcccaagatccgaacc
ttttga
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