Rhodoferax ferrireducens: Rfer_1975
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Entry
Rfer_1975 CDS
T00334
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfr03009
]
Rfer_1975
Enzymes [BR:
rfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Rfer_1975
Ribosome biogenesis [BR:
rfr03009
]
Prokaryotic type
ribosomal protein modification factors
Rfer_1975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ABD69700
UniProt:
Q21X03
LinkDB
All DBs
Position
2119856..2121250
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AA seq
464 aa
AA seq
DB search
MSEVITKSNTAPKVGFVSLGCAKALTDSELILTQLSAEGYQTSKTFQGADLVIVNTCGFI
DDAVKESLDTIGEALAENGKVIVTGCLGAKTAEGGGNLVRQMHPSVLAVTGPQATQEVMD
AVHANLPKPHDPFIDLVPNAFGVAGIKLTPRHYAYIKISEGCNHRCTFCIIPSMRGDLVS
RPIGDVLKEARALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPTKTRLLELAAALGD
MAEPYGAWVRLHYVYPYPSVDDLLPLMAAGKVLPYLDVPLQHSHPEVLKRMKRPASGEKN
LERIQRWREVCPDIVVRSTFIAGFPGETEEEFSHLLDFMREAQIDRAGCFAYSPVQGAVA
NDIGGMLPIELREERRARFMAVAEAVSSAKLQQRIGATMQVLVDSAPGLGKKGGLGRSYA
DAPEIDGVVKLLPPEKISKTLRVGEFTKARIVGAQGHDLVAQPF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagttattacaaaaagcaatacagcacccaaagtcggtttcgtcagcttgggt
tgcgccaaggcgctgacagattccgaactgatcctcacgcaattgagcgccgagggttat
caaacctccaagacatttcagggtgccgatctggtgatcgtcaacacttgtggtttcatc
gatgatgcggtcaaagagagtctggacaccatcggtgaagcgctggccgaaaacggcaag
gtgatcgtcaccggttgtttgggcgccaagaccgccgagggtggtggcaacctggtgcgg
caaatgcacccgagcgtgctggccgtcaccggcccgcaggcaacgcaggaggtgatggat
gcggtgcatgccaacctgcccaagccgcacgacccgtttattgatctggtgcccaatgct
tttggtgtggcgggcatcaagctcacgccccggcactacgcctacatcaagatcagcgaa
ggctgcaaccaccgctgcacgttttgcatcattccgtccatgcgcggcgatctggtgtcg
cgcccgattggtgacgtgctcaaggaagcgcgcgccctgtttgaaggcggtgtgaaagag
ttgctggtgatcagccaggacacgtcagcgtatggcgtggatgtcaaataccgcaccggt
ttctgggatggcaaacccaccaagacccgcctgctggaacttgccgcagcactgggcgac
atggctgagccttatggtgcctgggtgcgtttgcactatgtttacccgtacccgagtgtc
gatgacttgttgcctttgatggccgccggcaaagtgttgccctacctggatgtgcctctg
caacacagtcacccggaggtgctcaagcgcatgaaacgcccggccagcggcgagaaaaat
ctggagcgcatccagcgctggcgtgaggtctgtcccgatattgtggtgcgcagcacgttc
atcgcaggatttccgggcgaaacggaagaagagttttcgcatttgctcgatttcatgcgg
gaggctcaaattgaccgtgccggttgttttgcctacagcccggtgcagggtgctgtcgcc
aatgacattggcggcatgttgccgattgaattgcgcgaagagcggcgcgcacgcttcatg
gcggtcgccgaggcagtctcaagcgccaaactgcaacagcgcatcggcgccacgatgcag
gtgttggtcgattccgcgcctggtttgggtaaaaagggtggcctcggccgctcctatgcc
gatgcgcctgagattgacggtgtggtgaaactgctgccgccggaaaagatcagcaagact
ttacgggttggtgaatttaccaaagcgcgcattgtcggtgcacagggacacgatcttgtg
gctcagccgttttaa
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