Rhodoferax ferrireducens: Rfer_2058
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Entry
Rfer_2058 CDS
T00334
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfr03000
]
Rfer_2058
03036 Chromosome and associated proteins [BR:
rfr03036
]
Rfer_2058
Transcription factors [BR:
rfr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rfer_2058
Chromosome and associated proteins [BR:
rfr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Rfer_2058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ABD69783
UniProt:
Q21WS0
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All DBs
Position
2228125..2229036
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AA seq
303 aa
AA seq
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MLDARQLEALAAVLEHGGFGPAAQALNLTLAAVSLRIKGLESALGQRLLVRGKTVRATAA
GQALLAHVKQLRLMEADLVGGLGGHRPGAATAWQTLCVAVNADSLVSWFLPGVAALLTRH
RLLLDLVIDDQDHTHESLKNGDVVGCVSTQAQPMRGCLAENLGVMRYCCMAAAALVEKCH
TKTGALSVHRLLAAPAVIFNRKDGLQDIFLAQNFQLTTPQYPRHFVPAVDAFESALAHGL
GWGMVPELHLADLSARPGHAALVEVLPGSAVDVALYWHHWEREPASAQRLTQAVKQAARK
ILR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgcgaggcaactggaggccttggcggcggtgctggagcacgggggctttggt
ccggctgcgcaggctttgaacttgacgctggcggccgtctcgctgcgtatcaagggcctg
gagtccgcgctggggcagcgtttgctggtgcgcggcaaaacggtgcgcgccaccgccgcg
gggcaggccttgctggcccacgtcaagcaactgcgtctgatggaggccgatctggtcggt
gggctgggtggtcacaggccgggcgccgctaccgcctggcaaaccctgtgtgtcgctgtc
aacgccgattccctggtcagctggtttttgcccggtgtggcggctttgctgacacggcac
cggctgctgctggacctggtgattgacgaccaggatcacacccatgaatcgctcaagaac
ggcgatgtcgtgggctgtgtgagcacgcaggcgcagcccatgcgcggctgtctggccgaa
aatttgggtgtgatgcgctattgctgcatggcggcggctgcgctggtcgaaaagtgccac
accaagaccggggcgttgtcagtgcaccgcttgctggccgcgccagcggtcatctttaac
cgcaaggacggcttgcaggatatctttttggcacagaactttcagttgacgacgccccag
tacccgcggcattttgttcccgctgtggacgcgttcgaaagcgcgctggcgcacggtttg
ggctggggcatggtgccggagttgcacctggcggacctgtcggcgcgcccggggcatgcc
gcgctggtggaggtattgcccggcagcgcggtggatgtggcgctttactggcaccactgg
gagcgcgagcctgcgtccgcgcaacggctgacccaggccgtcaagcaggccgcgcgcaaa
attttgcgttga
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