Rhodoferax ferrireducens: Rfer_2090
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Entry
Rfer_2090 CDS
T00334
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rfer_2090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_2090
Enzymes [BR:
rfr01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Rfer_2090
Transporters [BR:
rfr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rfer_2090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
HUTI_composite_bact
AAA_22
AAA_29
Pox_A14
Motif
Other DBs
NCBI-ProteinID:
ABD69814
UniProt:
Q21WN9
LinkDB
All DBs
Position
complement(2263771..2265516)
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AA seq
581 aa
AA seq
DB search
MTKPISLSNRALYARLLSYVRPYWKAVFLAVIGMVGTAATEPVFPAIMKYLLDNGFQAKD
ARMVWLIPMGIVTLFLVRSVIVYCTGYLMTWISSRLVTDLRRTMFAKLLALPTHHYDEHS
AGQMISRLVYDVSNVTDAATSALITLVRESLTAIALIGYLLYLDWKLTLITLAIGPVIAF
TVKSFSKRMRAASQKSLQAMRFISHTIEETISAQQVVKIFGGQERQQKQFFEATEQFRRA
QMREAIPASAMTPITHIAASVAVAIIAFLALSQSTGQAGASAGSFISFITAMLMLISPVK
QLATVNPTIQRGLAASESIFELLDAAQEDDRGKRQLLRSKGEICFDNVSLRYLGAERFAL
NDISFRITAGQTVALVGASGGGKSTISALIPRFYPVTSGRVLVDGIDINDITLASLRQNI
ALVSQNVILFNDTVGANIAYGSLQTCSRDDVIRAARAANAWDFIEQLPNGLDTPIGENGA
KLSGGQRQRLAIARALLKDAPILILDEATSALDTESERQVQAALAVLMKNRTTLVIAHRL
STIEHADCILVLDQGRIVETGTHAELLRAGSYYANLSRLQG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccgatttctctgagtaatcgtgccttgtacgcccggttgctgtcgtatgtg
cggccctactggaaagcagtttttctggctgtcataggaatggtgggaactgcggctacg
gaacctgtgtttccagccatcatgaaatacctgctggacaacggttttcaagccaaagac
gcgcgaatggtttggctcatacccatgggcattgtgactttgttcttggtaagaagtgtc
attgtttattgcaccggctacctgatgacgtggatttccagtcgactcgtcaccgacctg
cgacgaaccatgtttgccaaactcctcgcgctaccgacccatcactatgacgagcattcg
gcggggcagatgatctcgcggctggtgtacgacgtgagcaacgtaaccgatgcggctacc
agcgctctaattacgctggtgcgggaatcgttgacggctatcgcactgattggatatctg
ctttacctggactggaagttgacgctcatcactttggccatcgggcccgtgatcgctttc
actgttaaatcattcagtaagcgaatgagggcggcaagccaaaaaagcctgcaggcgatg
cgtttcatctcgcacaccattgaggaaacaatttcggcccagcaggtggtcaagatcttt
ggtgggcaggagcggcaacaaaaacaattctttgaggccacggaacaattccgccgcgcc
caaatgcgagaagctatccccgcgtcggcgatgaccccgatcacgcatatcgctgcatcg
gtggcggttgcgatcattgctttcctggctttgagccagtctacgggtcaggctggcgca
tcagcgggtagcttcatctcgtttatcacggccatgctgatgctgatttccccagtcaag
caactcgcaaccgtgaacccgacaatccagcgcggcttggcagcatcggagagcatcttc
gagcttctggacgcagcgcaggaagacgaccgcggcaagcggcagttgcttcgcagcaaa
ggggaaatctgttttgacaatgtcagccttcgttacctgggcgcagagcgatttgccctg
aatgacatcagtttccggattactgcaggccaaaccgtggcactggttggtgcttcaggc
ggcggcaagagcacgatcagcgccttgattccgcgcttctacccggtcacatcaggccga
gtcctggttgacggtattgacatcaatgacatcacgctggccagcctgcgccaaaacatc
gcgctagtcagccagaatgtcatactttttaacgataccgtcggagccaatattgcctac
ggatcactccagacctgcagtcgggatgatgtgatcagggccgcgcgcgcggccaacgcc
tgggactttattgagcagttgcccaatggcctggacacgcccatcggtgaaaatggcgcc
aagctctctggtggtcaacgtcaacgcctcgccatcgctcgtgccttgctcaaggacgca
cccattctcatactcgacgaagccacttcggcgctcgatacagaatccgagcgtcaggtg
caggccgcactagccgtcctcatgaaaaatagaaccaccctggtcatcgcccatcggctc
agcaccattgaacacgctgattgcattttggtactggaccaagggcgcatcgttgagacg
ggcacccacgccgagctgctacgggctggcagctattacgccaacctgagtcggctgcag
ggatga
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