Rhodoferax ferrireducens: Rfer_2126
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Entry
Rfer_2126 CDS
T00334
Name
(GenBank) ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00330
Arginine and proline metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Rfer_2126
Enzymes [BR:
rfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Rfer_2126
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABD69850
UniProt:
Q21WK3
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All DBs
Position
2302559..2304847
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AA seq
762 aa
AA seq
DB search
MKFRFPIIIIDEDFRSENASGLGIRALAQAIESEGLEVLGVTSYGDLSQFAQQQSRASAF
IMSIDDEEFTPGPDLDPAVVNLRHFIEEVRRKNLDVPIYIYGETKTSRHLPNDILRELHG
FIHMFEDTPEFVARHIIREAKAYLESVQPPFFKALLDYAENGSYSWHCPGHSGGVAFLKS
PVGQMYHQFYGENMLRADVCNAVEELGQLLDHDGAIGKSERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPNDVVVVDRNCHVSILHAIIMTGAIPVFLKPTRNHFGIIGPIPKSEFE
PASIKAKIKANPLIKEHLPDVDLSRIKPRVLTLTQSTYDGVLYNTETVKNMLDGYVENIH
FDEAWLPHAAFHPFYGTYHAMGKKRSRPKHAMVYATQSIHKLLAGISQASQVLVQDSQTV
KLDKHLFNDAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESIAEALDFRRAMRKI
DEEYGTDWWFKVWGPEKLVEEGIGRADSWIIKGESAKAKAGVNWHGFGKMATGFNMLDPI
KSTVVTPGMDLNGKFAKTGIPASIVTKFLAEHGVVVEKTGLYSFFIMFTIGITKGRWNSM
LTALQQFKDDYAKNQPMWRILPEFCQKYPKYETMGLADLCQHVHQLYAKYDIARLTTDMY
LSDLAPAMKPSDAYAHIALRKTERVAIDDLEGRITVGLVTPYPPGIPLLIPGEVFNKKIV
DYLKFAREFNTQCPGFETDIHGLVEEQEADGQRHYYADCVKS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgctttcccatcatcatcattgacgaggattttcgctctgaaaacgcctcc
ggcctgggtatacgggcgctggcccaagccatcgagtcagaaggcctggaagtgctgggt
gtgaccagttatggtgacctgagccagtttgcgcagcagcaaagccgcgccagtgccttc
atcatgtccattgatgacgaggaatttacccccggtccggacctcgacccggccgtggtg
aacttgcgccacttcatcgaagaggtgcgtcgtaaaaatcttgatgtgccaatctatatc
tacggcgagaccaagacctcacgccatttgcccaatgacatcctgcgcgagctgcatggt
ttcattcacatgtttgaggacacgcccgagttcgtggcgcgtcacatcattcgcgaagcc
aaagcttatctggagagcgtgcagccgccgtttttcaaggccttgttggactacgccgag
aatggttcctactcctggcactgcccggggcactccggtggcgtcgccttcctgaaaagc
ccggtcggtcagatgtaccaccagttttatggcgagaacatgctgcgtgccgacgtctgc
aacgcagtggaagaactgggccaactgctggaccatgatggtgcgattggcaagagcgag
cgtaatgcggcgcgcatcttcaatgccgaccactgcttttttgtcaccaacggcaccagt
accagcaacaagatggtgtggcaccacacggtggcgcccaatgacgtggtggtggtggac
cgcaattgccatgtgtccatcctgcacgccatcatcatgaccggggccattccggtgttt
ttgaagcccacgcgcaaccacttcggcatcatcgggccgattcccaagagcgagtttgag
ccagcgtccatcaaggcaaaaatcaaggccaaccccttgatcaaggagcatctgcccgac
gtggacctgagccggatcaagccgcgcgtgctgacgctgacccagtccacctacgacggt
gtgctgtacaacaccgagacggtcaaaaacatgctggacggctatgtggagaacatccac
tttgacgaagcctggttgccacatgcggcatttcacccgttttacggcacctaccatgcg
atgggtaaaaagcgctcgcgccccaagcacgccatggtctatgccacgcaatcgatccac
aagctgctggccggcatcagccaggccagccaggtgctggtgcaggattcgcaaaccgtc
aagctcgacaagcacctgttcaacgacgcgtatctgatgcacacctctacctccccgcag
tacagcatcattgccagttgcgacgtggctgccgccatgatggagccacccggcggcacc
gcgctggtggaagaaagcatcgctgaagcgctcgatttccgccgtgccatgcgcaagatc
gacgaagaatacggcaccgactggtggttcaaggtgtggggacctgaaaaactggtggaa
gaaggcattggccgcgccgacagctggatcatcaaaggcgagtcagccaaagccaaggcg
ggtgtcaactggcacggttttggcaaaatggccaccggcttcaacatgctcgacccgatc
aaatcgacggtggtcacgcccggcatggacttgaacggcaagtttgccaagaccggcatt
ccggccagtatcgtcaccaagttcctcgccgaacacggcgtggtggtcgagaaaaccggg
ctttacagctttttcatcatgttcaccatcggcatcaccaagggccgctggaacagcatg
ttgaccgccttgcagcagttcaaggacgactacgccaagaaccagccgatgtggcgcatc
ctgcccgagttttgccagaagtaccccaaatacgaaaccatggggctggctgacctgtgc
cagcacgtgcaccagctctacgccaaatatgacattgcgcgcctgacgaccgacatgtat
ttaagtgacctggcgccggccatgaagcccagcgatgcttatgcccacattgcgctacgc
aagaccgagcgcgtggcgattgatgatctggaaggtcgcatcacggttggcctggtcaca
ccttacccgcccggcattcccttgctgataccgggtgaagtgttcaacaagaaaatcgtg
gactacctgaaatttgcccgcgagttcaatacccagtgccccggttttgaaaccgacatt
catggactggtggaagaacaggaggctgacgggcagcggcactattacgcggattgcgtc
aagtcctga
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