Rhodoferax ferrireducens: Rfer_2214
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Entry
Rfer_2214 CDS
T00334
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00010
Glycolysis / Gluconeogenesis
rfr00020
Citrate cycle (TCA cycle)
rfr00260
Glycine, serine and threonine metabolism
rfr00280
Valine, leucine and isoleucine degradation
rfr00310
Lysine degradation
rfr00380
Tryptophan metabolism
rfr00620
Pyruvate metabolism
rfr00630
Glyoxylate and dicarboxylate metabolism
rfr00640
Propanoate metabolism
rfr00670
One carbon pool by folate
rfr00785
Lipoic acid metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
rfr01210
2-Oxocarboxylic acid metabolism
rfr01240
Biosynthesis of cofactors
Module
rfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rfr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rfr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rfer_2214
00020 Citrate cycle (TCA cycle)
Rfer_2214
00620 Pyruvate metabolism
Rfer_2214
00630 Glyoxylate and dicarboxylate metabolism
Rfer_2214
00640 Propanoate metabolism
Rfer_2214
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rfer_2214
00280 Valine, leucine and isoleucine degradation
Rfer_2214
00310 Lysine degradation
Rfer_2214
00380 Tryptophan metabolism
Rfer_2214
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rfer_2214
00670 One carbon pool by folate
Rfer_2214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfr04147
]
Rfer_2214
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Rfer_2214
Exosome [BR:
rfr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Rfer_2214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
FAD_binding_2
Pyr_redox_3
NAD_binding_8
Thi4
AlaDh_PNT_C
Biotin_lipoyl_2
DAO
HI0933_like
GCV_H
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABD69938
UniProt:
Q21WB5
LinkDB
All DBs
Position
2424497..2426356
Genome browser
AA seq
619 aa
AA seq
DB search
MALIDIKVPNIGDFAEVTVIELLVKPGDTVRAEQSLITVESDKASMEIPCSHAGVVKELK
VALGDKVSEGSVLLVLEAAEAPVVPDIKPNQAVAPVASTQAATQTVASPAVSAPIPVATA
ASYAGGVDLDCDLLVLGGGPGGYSAAFRAADLGLKVILVERYAQLGGVCLNVGCIPSKAL
LHVAAVIDEVSHMAALGVDFGAPTVSVDKLRAHKEKVVTKLTGGLAAMAKMRKVTVVRGY
GAFVGANHVQVEETTGTSQEKTGKTQTIAFKKCIIAAGSQAVRLPFMPDDPRVVDSTGAL
ALKEVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKIWQKMNAPR
FDNIMLKTKTVGARATPEGIEVTFAAAEEGVKVPEPQTYDLVLQAVGRTPNGKKIAAEKA
GVAVTDRGFINVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNKEL
ASAAFNARVIPSVAYTDPEVAWVGLTEDQAKAQGIKVKKGLFPWTASGRAIANGRDEGVT
KLLFDDSEDAHGHGKILGGGMVGTHAGDMIGEIALAIEMGADAIDIGKTIHPHPTLGESI
GMAAEVAHGSCTDLPPARK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcactgatcgacatcaaagtccccaacattggcgacttcgccgaagtcaccgtcatc
gagctgctggtcaagcccggcgacaccgtccgggccgagcaaagcctgatcacagtggag
tccgacaaggcgtccatggaaattccctgcagccacgcgggcgtcgtcaaggagctcaag
gttgcgctgggcgacaaggtctctgaaggctcggtgttgctggtgctggaggcggcagag
gctcctgtcgttccagatatcaagccaaatcaggctgtagcccccgtcgcgtctacgcag
gcagctacacaaacagtagcatctccagctgtgagcgcgcccatcccagtcgccactgcc
gccagctatgcaggcggcgtcgatctggattgcgatttgctggtgctcggcggcggcccc
ggtggttattcggctgccttccgcgcggcggatttgggcctcaaagtcatcctggtcgag
cgctacgcccaactgggcggtgtctgtctgaacgtgggctgcatccccagcaaggcgctg
ctgcacgtggctgcggtcatcgatgaagtcagccacatggccgcgctcggcgtggacttt
ggcgcgcccacagtcagtgtggacaagctgcgtgctcacaaagagaaagtcgtcaccaag
ctcaccggcggcctggccgccatggccaagatgcgcaaggtgaccgtggtgcgcggctac
ggcgcgtttgtcggcgccaaccatgtgcaggtcgaagaaaccaccggcacatcccaagag
aaaaccggcaagacgcagaccattgcgttcaagaaatgcatcatcgctgcgggcagccaa
gccgtgcgcctgccgttcatgccagacgatccccgcgtggtggacagcaccggcgcgctg
gcgcttaaagaggtgcccaaacgcatgctgatcctgggcggcggcatcatcggcctggaa
atgggcacggtctacagcacgctcggcgcccgcctggacgtggtcgaaatgctcgacggc
ctgatgcagggcgcggatcgcgacctggtcaagatctggcaaaagatgaatgccccgcgt
ttcgacaacatcatgctcaagaccaaaacggtcggcgccagagccacgcccgagggcatc
gaggtgacgtttgccgcagcagaggagggcgtgaaagtgcccgaaccgcaaacctacgac
ctggtgttgcaggcggtgggccgcacgcccaacggcaagaagatcgccgccgagaaagcc
ggcgtcgcagtcacagaccgtggcttcatcaatgtcgacatccagatgcgcaccaacgtg
ccccacatcttcgccatcggcgacatcgtgggccagccgatgctggcgcacaaggcggtg
cacgaagcgcatgtggcagcggaagtgatagccggtgaattacaaggcaacaaagagctg
gccagcgccgccttcaacgcccgcgtcatcccgagcgtggcctacaccgaccccgaggtg
gcctgggtcggcctgaccgaagaccaggccaaggcgcaaggcatcaaggtcaagaagggg
ctgttcccctggacggcgtccggccgtgccattgccaacggccgcgacgaaggcgtgacc
aagctgctgtttgatgacagcgaggacgcgcacggccacggcaagatcctgggcggcggc
atggttggcacgcatgcgggcgacatgattggtgagattgcgctggcgatcgagatgggc
gctgacgccatcgacatcggcaagaccattcacccgcatcccacgctgggcgagagcatc
ggcatggcggctgaagtggcgcatgggagttgcacggacttgccgccggcgcgtaagtag
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