Rhodoferax ferrireducens: Rfer_2248
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Entry
Rfer_2248 CDS
T00334
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfr03032
]
Rfer_2248
03036 Chromosome and associated proteins [BR:
rfr03036
]
Rfer_2248
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_2248
DNA replication proteins [BR:
rfr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rfer_2248
Chromosome and associated proteins [BR:
rfr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Rfer_2248
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Rfer_2248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABD69970
UniProt:
Q21W83
LinkDB
All DBs
Position
2462319..2462657
Genome browser
AA seq
112 aa
AA seq
DB search
MTSANFFKETIRLTLLPYQGFFVNKTELIEHIALNADISKAAATRALESAIGAVKITLKK
GGSVSLVGFGTFAVGKRAARVGRNPRTGDAIKIKAAKVPKFRPGKALKDALN
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgcaaatttttttaaagagacaattcgattaactctgcttccataccaaggg
ttctttgtgaataaaaccgaactaattgagcacattgcactgaatgctgacatttccaag
gcagcggctacccgcgcgctggagtcggccattggcgcagtcaaaatcactctgaaaaaa
ggcggctctgtgtcgctggtgggttttggtacctttgccgttggcaaacgtgctgcgcgt
gtggggcgtaacccacgtactggcgacgcaatcaaaatcaaagcggcgaaagtgccaaaa
ttccgtccaggtaaagcgttgaaagatgccctgaactga
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