Rhodoferax ferrireducens: Rfer_2256
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Entry
Rfer_2256 CDS
T00334
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr03030
DNA replication
rfr03430
Mismatch repair
rfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rfer_2256
03430 Mismatch repair
Rfer_2256
03440 Homologous recombination
Rfer_2256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfr03032
]
Rfer_2256
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_2256
Enzymes [BR:
rfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rfer_2256
DNA replication proteins [BR:
rfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rfer_2256
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rfer_2256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DrmE_N
Motif
Other DBs
NCBI-ProteinID:
ABD69978
UniProt:
Q21W75
LinkDB
All DBs
Position
2469576..2470586
Genome browser
AA seq
336 aa
AA seq
DB search
MSTTTVAPWIAAQTQTLLAQNGHAWLLLGPSGLGQYRLALALVCAWLCEQPTEQGACGVC
GSCHAIEVRTHADLCVLMPETVALELGWPLSEKAQGEIDAKTRKPSKEIRVDAMRDAVEF
SQRTSARGRGKAVLVFPAERMNHVTANALLKTLEEPPGDVKFVLASDAAHQLLPTIRSRC
LAHTMVWPALDTSLAWLQQQGLDGRQAAVMLRACGGRPDDALLLAQAGPSGPTPASWVKL
PNAMARGDVGGLKDWTPTQAVDALQKLCHDLLAVKTGATPRFFDALDLPAGSSLATLTAW
GKALAAAVRTVEHPFNSGLMLEALVSQAQNAINAKN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccacagtggcgccatggattgccgcgcaaactcaaacgctgctggcgcaa
aacggccacgcctggttattgctgggcccctccggactcggccagtaccgcctggcactg
gctctggtgtgcgcctggttgtgtgaacagccgacagagcagggcgcttgtggcgtttgc
ggcagttgccacgcgatcgaggtgcgcacccatgctgacttgtgcgtgttgatgcctgag
accgtggcactggaactgggctggcccttgagcgaaaaagcgcaaggcgagattgatgcc
aaaacacgcaagccgagcaaggaaatccgggtcgacgccatgcgcgacgcggtggagttt
tcgcagcgcaccagcgcccgcggtcggggcaaggcggtgctggtgtttccggccgaacgc
atgaaccacgtgactgccaatgcgctgctcaagaccctggaagagccaccgggcgacgtg
aagtttgtgttggccagcgatgccgcccaccagttgctgcccacgattcgcagtcgctgc
ctggcgcacaccatggtttggcctgcgcttgatacctcgctggcgtggttgcagcagcaa
ggcctggacgggcgccaagcggctgtgatgctgcgcgcctgcggtggccgaccggacgac
gccctgttgttggcacaagctggcccctccgggccgacgcccgccagctgggtcaagctg
cccaacgcgatggcgcgcggtgacgtgggcggactcaaggactggaccccaacgcaagcc
gtcgatgccttgcagaagctctgtcatgacctgctggccgtcaaaactggtgccacgccc
cggttttttgatgcccttgacttgcccgccggcagttccctggccaccttgacggcttgg
ggcaaggcgctggcagctgccgtgcgcacggtggagcacccgtttaacagcggtttgatg
ctggaagcattggtgagtcaggcgcaaaatgccatcaatgcaaagaactag
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