KEGG   Rhodoferax ferrireducens: Rfer_2316
Entry
Rfer_2316         CDS       T00334                                 
Name
(GenBank) Helicase c2
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
rfr  Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfr03400]
    Rfer_2316
Enzymes [BR:rfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Rfer_2316
DNA repair and recombination proteins [BR:rfr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Rfer_2316
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 Helicase_C
Other DBs
NCBI-ProteinID: ABD70034
UniProt: Q21W19
LinkDB
Position
complement(2539165..2541177)
AA seq 670 aa
MNLQNLTRETFAPGGLLSRMVEEFTPRVGQTDMAVAVARTIEDGGVLVVEAGTGIGKTFS
YLVPALLSGTRVLLSTATKTLQDQLFGRDLPRLMKALSLPVRTALLKGRGSYLCLHRLAV
ARQDADPSDRVLGRTLAKIEAWAQLTRSGDLAELPGLDERSPAIAVVTSTRDNCLGSQCP
EFRDCHVNQARREALAADVVVINHHLFFADLAIRESGMAELLPSVQTVIFDEAHQLNETG
VQFLGQQLTTGQLLDFVRDLLFHGLQHARGLQDWQTLAFDAEHAARDLRLVVGQASPGAK
LRWVGAAPDQVDESAWHDALGALQAACARVMLALDTVSAVAPDLMRLRERASVFIERLAF
FSDDCASESVRWLDVGVQLRLVESPLDIANAVQTRLIKSTAADASQRAWIFTSATLGADA
QLRWFTEPCGLADAEILKIDSPFNYAEQAALYVPRHLPRPSDPGHSAQVAEFVARAACVI
GGRTLVLTTTLRALQAVSESLQRHFAESRSLEILVQGQQPKRELMQRFRQGDQGDRQGCI
LVASASFWEGVDVPGDALQMVVIDKLPFAPPTDPLVEARSRRLVAAGRSVFKDYALPEAA
IALKQGAGRLIRRESDRGILVVCDTRLALMGYGKKLLSALPSMRQISSEEELTEVLQALT
RPSTRDQCSF
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaatttgcaaaatctgacgcgtgagacctttgcccccggcggcttgttgtcgcgcatg
gtcgaagagttcacacccagagtgggccaaaccgacatggccgtggcggttgcgcgaacg
atcgaggacggcggggtgctggtggtcgaggcgggcactggcattggcaagacgttctcg
tacctggttcctgccctattgagtggcacgcgggtgctgctgtcgaccgccaccaagaca
ttgcaggatcaattgtttggtcgcgatcttccgcgtttgatgaaagccttgagtttgcca
gtccgtaccgccttgctgaaaggccggggcagctatttgtgtttgcatcgcctggccgtg
gcccggcaggacgccgatccttctgatcgtgtgctagggcggactctggccaaaatcgaa
gcttgggcgcagcttacccgcagtggtgacttggctgagttgccgggtctggatgaacgc
tctcccgcgattgcggtggtgacgtcaacaagggacaactgtctgggctcgcaatgcccc
gagtttcgggactgtcatgtcaatcaggctcggcgcgaagctctggccgccgatgtggtt
gtcatcaaccaccatttattttttgctgatttggcgattcgcgagtcgggtatggcggag
ttgctgccgtctgtgcaaacggttatttttgatgaagcgcatcaactcaatgaaactggc
gtgcagtttctgggtcagcaattgaccaccgggcagctattggattttgttcgcgatctg
ctgtttcatggcctgcagcatgcgcgagggttgcaggactggcagaccctggcattcgat
gccgagcacgccgcgcgcgatctgcgactggtcgtgggccaggccagcccaggtgccaaa
ctgcgctgggtcggggcggcaccggatcaagtggatgagtcggcctggcatgatgctctt
ggcgctctgcaggcggcgtgtgcccgggtgatgctggccctcgataccgtcagcgccgtc
gcgccggatctcatgcgtttgcgtgaaagagcgagcgtttttatcgagaggcttgctttt
ttctcagacgactgtgcgtctgaatcggtgcgctggctcgatgttggcgtgcaactcagg
ctggtcgagtcacccttggatattgcgaacgcggttcagacgcgactgatcaagtcaact
gcagcggatgcttcacaacgcgcctggatatttacctccgcaaccttgggtgcagacgcc
cagttgcgctggtttaccgagccctgcggtttagccgatgctgaaattctgaaaattgac
agcccattcaactatgccgagcaggcggccctgtatgtgccgcggcatttgcccaggcct
agcgatccggggcacagtgcgcaagtggccgaatttgtggctcgggcggcgtgtgtgatc
ggtgggcgcacgctggtcctgacaacaaccctgcgtgcactgcaagccgtgagcgagtca
ttgcagcgccattttgccgaatcaagatctctggaaatactggtgcagggacaacagccg
aaacgcgaattgatgcagcgctttcgccagggtgaccagggcgacaggcaaggttgcatt
ctggtggcgtcagcgtctttttgggaaggtgtggatgtgcccggcgacgcgttacagatg
gtggtcattgacaagcttccttttgcaccgcccaccgatccactggtggaggcgcgctcc
agacggctggtggccgctggtcgcagcgtgtttaaagactatgctttgcccgaggcggct
atcgccctcaagcaaggtgcgggtcgcctgattcgacgcgagtctgatcgtggtattttg
gtggtgtgtgatacccgcctggctctcatgggctacggaaagaagctgctgtcagccctg
ccgtcgatgaggcaaatcagttcagaagaagagctgaccgaggtgctccaggcgcttacc
agaccttccaccagggatcagtgttcgttttaa

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