Rhodoferax ferrireducens: Rfer_2565
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Entry
Rfer_2565 CDS
T00334
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfr03009
]
Rfer_2565
Ribosome biogenesis [BR:
rfr03009
]
Prokaryotic type
ribosomal protein modification factors
Rfer_2565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
DUF3110
Motif
Other DBs
NCBI-ProteinID:
ABD70282
UniProt:
Q21VC1
LinkDB
All DBs
Position
complement(2826450..2828180)
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AA seq
576 aa
AA seq
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MQTQNFIPGKDASLESTINNHQTRLQALGFHIEERSWLNPVDGIWSVHIRDRDCPLMFTN
GKGATRLACLASALGEFFERLSTNYFWTHYYLGPDIANRPYVHYPQERWFAPGEDGSWPP
ELLNADLHRFYNPEGGIEASSLVEFNSGNAERGICAIPYVRQRDGAVTYFPVNVIGNLYV
SNGMSAGNTQAEARTQALSEIFERHVKARIISEGICLPDVPQAVIARYPRIAAGIAALRA
AGFGILVKDASLGGQYPVMNVTLLHPEDQGCFASFGAHPRFEIALERALTELLQGRALDS
LAGFPAPGFDLEEVGSSTNIEIHFVDSSGVIHWKFLGDEPDHAFVDWNFSNTTAEDYAWA
VDRIHKDGRDIYIADFTHLGVYACRILVPGMSEIYPVDDLAFENNSVGNSIREAILNLPD
LDDEECSDLLDTLNESALADQRPVAGVIGLAADAGSFWSDLRVGELKTLLALAIGDEAAT
LEGCDWIKHFAQLNPQRRAVYACIESIINLAEMGDSGPYMDALRQLYGAGAVAQAHALIM
QTDRFMGLNAPGLALDGCEMHHKLLAAYDKVRASHA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacaaaactttatccccggcaaagatgcctctcttgaatccaccatcaataac
catcaaaccaggctgcaggcgcttggttttcatattgaggagcgctcctggctgaatccg
gtggacggcatctggtcggtgcatattcgcgaccgcgattgcccgctcatgttcaccaac
ggcaaaggcgccacccggctggcctgtctggccagcgccctgggcgaattttttgagcgg
ctctcaaccaattatttctggacgcattactacctgggccccgatattgccaaccggccc
tatgtgcattacccacaggagcgctggtttgcacccggtgaagacggcagttggccccct
gagttgctcaacgctgatttgcatcggttttacaaccccgaaggcggtattgaagccagc
agcctggtggagttcaactccggcaatgccgagcgcggcatttgcgccattccctatgtg
cgccagcgcgacggcgcggtgacctacttcccggtcaatgtgattggcaatttgtacgtc
agcaacggcatgtcggccggcaacacgcaggcggaggcgcgcacgcaagccttgtcggag
atatttgagcgccacgtcaaggcccgcatcatcagcgaaggcatttgcctgcccgatgtg
ccgcaggccgtgattgcacgttatccgcgcattgcggctggtattgcggcactgcgcgca
gccggctttggcattctggtcaaagatgcctcgctgggcggccaatacccggtgatgaat
gtgacgctgttgcaccccgaagaccagggttgctttgccagttttggcgcccacccgcgc
tttgagattgcgctggagcgtgcgttgaccgagctgctgcagggccgtgcgctggattcg
ttggcaggctttccggcaccgggctttgatctggaagaggttggcagctccaccaacatc
gaaatccatttcgtcgattccagcggtgtgattcactggaaatttttgggcgacgagccg
gatcacgcgtttgtcgactggaacttcagcaacaccacggccgaggattacgcctgggcg
gtggatcgcattcacaaggacgggcgcgacatctacattgccgacttcacccacctgggc
gtctatgcctgccgcattctggtgccgggcatgtccgagatttatccggtcgatgacctg
gcgtttgagaacaacagcgtgggcaacagcatccgcgaggcgattttgaatctgcccgat
ctcgacgacgaagaatgttcagacctgctcgatacgctcaacgagtcggcgctggccgat
cagcgcccggtggccggcgtgatcgggctggccgccgatgccggctctttctggagcgac
ttgcgcgtgggcgagctcaagaccctgctggcgctggccattggtgatgaagcggccacg
ctggagggctgcgactggatcaagcactttgcgcagctcaacccgcaacggcgcgcggtt
tacgcctgcatcgagagcatcatcaatctggccgagatgggtgacagtggaccgtatatg
gacgccttgcgccagttgtacggtgccggggccgtggcgcaggcgcacgcgctcatcatg
cagaccgaccgtttcatgggtttgaatgcgccgggcctggcgcttgatggttgtgaaatg
caccacaagttgttggcggcttatgacaaggtgcgtgccagccatgcgtga
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