Rhodoferax ferrireducens: Rfer_2595
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Entry
Rfer_2595 CDS
T00334
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00071
Fatty acid degradation
rfr00362
Benzoate degradation
rfr00650
Butanoate metabolism
rfr01100
Metabolic pathways
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
rfr01212
Fatty acid metabolism
Module
rfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rfer_2595
09103 Lipid metabolism
00071 Fatty acid degradation
Rfer_2595
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rfer_2595
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rfer_2595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Pyr_redox_2
NAD_binding_7
Pyr_redox
ApbA
Methyltransf_12
F420_oxidored
FAD_binding_3
TrkA_N
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ABD70311
UniProt:
Q21V92
LinkDB
All DBs
Position
complement(2857307..2859427)
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AA seq
706 aa
AA seq
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MSQDPSTEVVARELRGNILLVMINNPPVNALGVAVRCGIVAAIDAADADPAVQAVLIIGT
GRNFIAGADIREFGKPPLPPSLPDVCNRIEACSKPVVAAIHGAALGGGLEIALAAHYRLA
ATDVKLGLPEVQLGLMPGAGGTQRTPRLIGAKAALDLMLSGRHMGAEEAHALGLVDRLGH
SNDILADGLAYTQELLATHAPVRRTRDAQALSDRQANRASIEAVRAETGKKSRGLFSPLK
IVEAVEAALDKSFDEGLRIERELFLQCLDSAQRAGLIHAFFAEREVLKAPETRNTKPRAI
AHVGVVGGGTMGAGIAVAVLDAGLSVTMIERDEAALARGHAHIEKVYNGLIAKGRMTTDA
KAANLARFVGSTSYDALAPADIVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDI
DVIAASISRPADVVGLHFFSPANIMKLLEIVVPAKVSADVVATAFELAKKLHKVPVRAGV
CDGFIGNRILAAYRMAADYMMEDGASPYQIDQAVRDFGYPMGPFQVSDLAGGDIGWATRK
RKAATRDPRARYVQIADRICERGWFGQKTGRGYYLYPEGARTGTPDPEIEAIIDAERARA
GITPRSFTNEEIMRRYMAAMINEGANVVHQRIALRPLDVDVTFLYGYGFPRHRGGPMKYA
DTLGLPKVLADIREFAKEDPLFWQPSPLLVELVERGANFDSLNKSE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggacccgtccaccgaagtcgtcgcccgcgaactgcgcggcaacattcttctc
gtcatgatcaataacccgccggtcaacgcgctgggtgtggccgtacggtgcggcatcgtg
gcggcgatcgacgcagccgatgcagacccagccgtccaagcggtgctcatcatcgggaca
ggacgcaacttcatcgcaggcgcagatatccgtgagttcggcaagccgccactgccgccg
tcattgcccgatgtctgcaaccggattgaagcctgcagcaagcccgtggttgcagcgatc
catggcgctgctttgggtggtggactggagatcgcgctcgcggcccactaccggttggcg
gcgactgatgtcaagctcggactacccgaggttcagctcggcctgatgccgggtgcgggc
ggcacgcaacgcacaccacgtttgatcggtgcaaaagccgccctggacctgatgctcagc
ggccgccacatgggtgccgaagaagcgcacgcgctcggtttggttgaccggctgggacac
agcaatgacatcctcgccgatggactggcgtacacgcaggaattgctggccacgcacgcc
ccggtgcgccgcacgcgcgatgcccaggcgctttccgaccggcaggcgaaccgtgccagc
atcgaggccgtgcgcgctgaaacaggcaagaagtcacgcggcctgttctcaccgctgaaa
attgtcgaggcggttgaggcggcgctcgacaagtctttcgacgaaggcctgcgcattgag
cgcgagctgttcctgcaatgcctggacagtgcgcagcgcgccggactgatccacgccttc
tttgccgagcgtgaagtgctcaaagcgcccgagactcgcaacacgaagccacgcgccatc
gcgcatgtcggcgtggtcggcggtggcacgatgggcgccggcatcgcggtggcggtactc
gatgcgggcctgtctgtcacgatgatcgagcgtgacgaagcggcgctggcacgcgggcat
gcccatattgaaaaggtctacaacggtctgatcgccaaggggcgcatgaccactgatgcc
aaggccgccaacctggcgcgcttcgtcggcagcacctcgtacgacgcactcgcgccagcc
gatatcgtgatcgaggcagtgttcgaggacatggcggtcaagcaggctgttttcgccgaa
ctcgatcgcgtgtgtaaacctggtgcggtgctggccaccaacacgtcctatctcgacatc
gacgtcatcgccgccagcatttcacgtccagcggacgtcgtgggtctgcattttttctcg
cccgccaacatcatgaagttgctcgaaatcgtggtcccggccaaggtctcggcggacgtc
gtggccaccgcatttgaactcgcgaaaaagctgcacaaggtgccggtgcgggccggcgtg
tgcgacggcttcatcggcaaccggatcctcgcggcttatcgcatggcggccgactacatg
atggaagacggcgcctcgccctaccagatcgaccaggccgtgcgagacttcggttacccg
atggggccgttccaggtgtctgacctggccggcggtgacatcggctgggccacccgaaaa
cgcaaggcggccacacgcgatccgcgggcacgttacgtgcagattgccgaccgcatctgc
gagcgtggctggttcggccagaagactggccgcggctactacctgtaccccgaaggcgcg
cgcaccggaacgcccgaccccgagattgaggccatcatcgatgccgagcgcgcgcgggcc
ggcatcacgccgcgcagcttcaccaacgaagagatcatgcgccgctacatggccgcgatg
atcaacgaaggcgccaacgtcgtgcatcagcgcatcgcgctgcgcccgctcgacgtggac
gtgaccttcctgtacggctacggttttccgcgccatcgcggcggcccgatgaaatacgcc
gacacgctgggcctgcccaaggtgctggccgacatccgcgagttcgccaaagaagacccg
ttgttctggcagccctcgccgttgctggtcgagctggtcgaacgcggcgccaatttcgac
agtctcaataaatccgaataa
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