KEGG   Rhodoferax ferrireducens: Rfer_2642
Entry
Rfer_2642         CDS       T00334                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rfr  Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rfr03032]
    Rfer_2642
   03036 Chromosome and associated proteins [BR:rfr03036]
    Rfer_2642
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rfr02048]
    Rfer_2642
Enzymes [BR:rfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Rfer_2642
DNA replication proteins [BR:rfr03032]
 Prokaryotic type
  DNA Topoisomerases
   Rfer_2642
Chromosome and associated proteins [BR:rfr03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Rfer_2642
Prokaryotic defense system [BR:rfr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Rfer_2642
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim
Other DBs
NCBI-ProteinID: ABD70358
UniProt: Q21V45
LinkDB
Position
complement(2907070..2909040)
AA seq 656 aa
MALKPTNEYSEASIRVLKGLEPVKQRPGMYTTTDTPLHVIQEALDNAADEALAGHGKKIR
VVLHLDGSVSIEDDGRGIPFGLHPTENAPVIELVFTQLHAGGKFDKGKGGAYSFSGGLHG
VGVSVTNALATRLEATTYREGKVASLVFAGGDVIEPLRVREPAPGERKSGTTVRVWPDAK
YFETLALPMAQLVHLLRSKAVLMPGVTVTLVNEKTKETQNWLFKGGLLDYLMQTLAGELV
IPVFEGDGFADAQHDNFAEGEGASWCVAFTEDGPLVRESYVNLIPTTAGGTHEAGLRDGL
FTAVKSFIELHSLLPKGVKLMPEDVFARASYVLSAKVLDPQFQGQIKERLNSRDAVRLVS
NYVRPALELWLNQHVEYGKKLAELAIKAAQTRQKAGQKVEKRKGSGVAVLPGKLTDCESR
DLAYNEVFLVEGDSAGGSAKMGRDKESQAILPLRGKVLNTWEVERDRLFANNEIHDISVA
IGIDPHGPNDTPDLSGLRYGKVCILSDADVDGSHIQVLLLTLFFKHFPKLIETGRIFVAR
PPLFRVDAPARGKKQASKAYALDEGELTAILDKLRKEGVREGAWSISRFKGLGEMNAEQL
WDTTLNPDTRRLLPVHLGSIDFLQTQGLFTQLMGKGEAAARRELMELHGDAVEIDI
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggcactcaaacccaccaacgaatactctgaagcctcgatccgtgtgctgaaagggctg
gagcccgtcaagcagcgcccgggcatgtacaccaccaccgacacgccgctgcatgtgatc
caggaggcgctcgacaacgccgctgacgaggcgctggccgggcatggcaagaagatcagg
gtggtactgcaccttgacggctcggtcagcatcgaggacgacggccgcggtattccgttt
ggcctgcacccgacggaaaacgccccggtgatcgagctggtgttcacacaactgcacgcc
ggtggcaagtttgacaagggcaagggcggcgcctacagcttctcgggcggcttgcatggc
gtgggggtgagcgtcaccaacgcgctggcgacgcggctggaggccaccacttaccgggag
ggcaaggtcgccagtctggtgtttgccggcggtgacgtgattgagcctttgagagtgcgg
gaacccgcacccggtgagcgcaagtccggcaccacggtgcgggtctggccggacgccaaa
tattttgaaacactggcgctgccgatggcgcaactggtgcatctgctgcgcagcaaggcg
gtgctgatgccgggcgtcaccgtgacgctggtcaacgagaaaaccaaagagacgcaaaac
tggctgttcaagggcggtctgctggactacctgatgcaaaccctggccggcgagctggtg
atcccggtgttcgagggtgatgggtttgccgacgcccagcatgacaattttgccgaaggc
gagggcgcctcctggtgcgtcgccttcaccgaggacggccctttggtgcgtgaaagctat
gtcaacctgatccccaccacggctggcggcacgcacgaggcgggcttgcgcgacggtctg
ttcacggcggtcaagagctttatcgagctgcattcgctcttacccaaaggtgtgaagttg
atgcccgaagacgtgttcgcccgcgccagctacgtgttgtcggccaaggtgctggacccg
cagtttcagggccagatcaaggagcggctgaactcgcgcgacgcggtgcggctggtctca
aactatgtgcgcccggcgctggagctgtggctgaaccagcatgtggagtacggcaagaag
ctggcggagctggcgatcaaggcggcgcagacgcgtcagaaagccggtcagaaggtcgag
aaacgcaagggctcgggtgtggccgtgctgccgggcaagctgaccgattgcgaaagccgc
gacctggcctacaacgaggtgtttctggtcgagggcgactcggccggcggcagcgccaag
atggggcgcgacaaagagagtcaggcgattttgccgctgcgtggcaaggtgctcaacacc
tgggaagtggagcgcgaccgcctgtttgccaataatgaaatccacgatatttcggtggcg
attggcatcgatccgcatggccccaatgacacgcccgacctgagcgggctgcgctacggc
aaggtctgcatcttgtcggatgccgatgtggacggttcacacatccaggtgttgctgctg
acgctttttttcaagcatttcccgaagctgatcgagaccggccgtatttttgtggcccgg
ccgcctttatttcgtgtcgatgcgcccgcgcgtggcaagaagcaagcctccaaggcctac
gcgctcgatgagggcgaactgactgccattctggacaaactgcgcaaggaaggcgtgcgc
gaaggcgcctggagcatcagccgcttcaagggcctgggggaaatgaatgccgagcagctg
tgggacaccaccctcaaccccgatacccggcgcttgttgccggtgcacctgggcagcatc
gactttttgcaaacgcaaggcctgttcacccaactgatgggcaagggtgaggccgctgcc
cgacgtgagttgatggaattgcacggcgatgcggtggagattgatatctaa

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