Rhodoferax ferrireducens: Rfer_2658
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Entry
Rfer_2658 CDS
T00334
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00260
Glycine, serine and threonine metabolism
rfr00460
Cyanoamino acid metabolism
rfr00630
Glyoxylate and dicarboxylate metabolism
rfr00670
One carbon pool by folate
rfr00680
Methane metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
rfr01230
Biosynthesis of amino acids
rfr01240
Biosynthesis of cofactors
rfr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rfer_2658
09102 Energy metabolism
00680 Methane metabolism
Rfer_2658
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rfer_2658
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rfer_2658
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rfer_2658
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rfer_2658
Enzymes [BR:
rfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rfer_2658
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABD70374
UniProt:
Q21V29
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All DBs
Position
2925402..2926646
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AA seq
414 aa
AA seq
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MYNRNILIEQTDPEIFAAIAAENARQEQHIELIASENYASPAVMAAQGTQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRVKQIFGADAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERKAHESKPKLIIAGASAYSLR
IDFARFAKVAKDVGAIFMVDMAHYAGLIAAGIYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKAQHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLV
SRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARITANLIADVLDNPRDSANIDAVRAKVNALTKRFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaccgtaacatcctcatcgaacaaaccgaccccgaaatttttgccgctattgca
gcggaaaacgcccgccaggaacagcacatcgagctgatcgccagcgaaaactacgcctca
cccgccgtcatggccgcgcagggcacgcaactgactaataagtatgctgaaggctacccc
ggcaaacgctactacggcggttgcgagtttgtggacattgccgagcaactggccattgac
cgcgtcaagcaaatctttggcgccgatgccgccaacgtgcaaccccattgcggcgcgtcc
gccaacgaggcggtgtttctggcctttttgaaacccggcgataccatcatgggcatgagc
ctggctgaaggcggccacctgacgcacggcatggcactgaacatgagtggcaagtggttc
aacgtcgtcagctacggcctgaacgacaaggaagagattgactacgacgccatggagcga
aaagcccatgagtccaaacccaaactgatcatcgccggtgcctccgcctacagcctgcgc
atcgactttgctcgctttgccaaggtcgccaaagacgtgggcgccatctttatggtggac
atggcgcactacgccggcctgattgccgccggcatctaccccaaccccgtgccacacgct
gacgtggtgaccagcaccacccacaaaagcctgcgcggcccgcgaggcggcatcattttg
atgaaagcgcagcacgagaaagccatcaacagcgccatcttccccggcctgcaaggtggc
ccgctgatgcatgtgattgcggccaaggcggtggcgttcaaagaagcgctacagcccgag
ttcaaggtctatcagcaacaagtgttgaccaacgcccgcgtcgtggctgaaacgctggtg
tcgcgcggcctgcgcattgtgagtggccgcactgaaagccacgtcatgctggtcgatctg
cgctccaaaagcatcactggcaaagaagctgaagcggtactgggcagcgcccacatgacc
atcaacaaaaatgccatccccaatgaccctgaaaaacccatggtcaccagcggcgtgcgc
atcggtaccccggccatgacgacccgcggcttcaaggacgaagaagcccgcattactgca
aatttgatagcagatgtactagataatccgagggatagcgccaatattgatgcagtacgc
gccaaggtcaacgcactaaccaaacgcttccctgtttatggataa
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